| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620539
Identifier: 116620539
GI number: 116620539
Start: 1744152
End: 1745126
Strand: Direct
Name: 116620539
Synonym: Acid_1417
Alternate gene names: NA
Gene position: 1744152-1745126 (Clockwise)
Preceding gene: 116620538
Following gene: 116620540
Centisome position: 17.5
GC content: 60.41
Gene sequence:
>975_bases ATGACAAAACAATTGACCAGACGTGAACTCCTCACCGCGATGGCGGGCGGCGCCGTTCTCACCGGTTGCGGAGTGGAGGA GCGCCAGGTCGCGTCCGCGCCGGTTTCCATAGTCAGGGCCCCGGCATACGATAACGCTGTCTACGACACCATGCTTCGCC TGCTGAAGCCGCTTGTAGGCGATGTCCGCGGGCGCAATATCCTGCTCAAACCTAACCTGGTGGAATTTGAGCCGGGCACC TGCATCAATACGCACCCCCTCGTGGTCCACGCCGCATATGAAGCCTTTCTTAAAATGGGCGCTGCGAGCGTGCGGATTGC CGAAGGCCCGGGACACCGCCGCAATACCCTCGATCTCGCCGAGGCGGCCGGCTACTTCCGGACCGTTCCGGCGTTCGAAG AAAACTTCACCGACCTCAACCTGGATGAAGTCACCCGCGTGCGCCCCGCGGGGCAGTTCTCGCGCATCAAGAAGCTCTAT CTTCCCAACAGCGCCCTCCGCGCCGACCTGCTGGTCTCGATCGCCAAAATGAAAACGCATCACTGGGTGGGTACCACGTT GTCCATGAAGAACCTCTTCGGCGTGGTTCCGAGCGGGATATACGGCTGGCCCAAGAATGTGCTGCATTGGGCGGGCATCG ATGAATCCGTCGCCGACCTGCACAATGCCTTTTCGAACCACTTTGCGATTGTCGACGGCATTGTGGGAATGGAGGGCAAC GGTCCCATTCAGGGAACCCCCAAGCCCGTCGGCGTACTGGTGGCGGGCAAAGATCCGGTAGCGGTGGATGCCACCTGCTG TCGCATCATGAAGATCGACCCCATGCGGATCCGCTATCTGCAACTGGCCCTGGGTGGCTCCGCATCGGCCATCCTCGAGG AAAACATCGCGCAGCTCGGAGAAACCATCCAGAGTGTATCCAACGCTTTCGAGCTCATTCCGGAATTCCGGAGGCTGCGC CTGGAGAACAGTTAG
Upstream 100 bases:
>100_bases TCCTCCAGCCGATGTTGCCTGCCGTAGCCTGATGGAGACCTCGCTCGATATGTTGGTGGCGCAAACGTCGAACGGGCAAG CGATCTTGTGGGGTTGATGG
Downstream 100 bases:
>100_bases ATGGAACCGACTACGACTCCCGCGGCTGTCCCCGAGCGCAAGCGCGGCTGGGGCTGGTATTTGCTGGTCTCACTCCTGGT GCTGGCGCCCGTCTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTKQLTRRELLTAMAGGAVLTGCGVEERQVASAPVSIVRAPAYDNAVYDTMLRLLKPLVGDVRGRNILLKPNLVEFEPGT CINTHPLVVHAAYEAFLKMGAASVRIAEGPGHRRNTLDLAEAAGYFRTVPAFEENFTDLNLDEVTRVRPAGQFSRIKKLY LPNSALRADLLVSIAKMKTHHWVGTTLSMKNLFGVVPSGIYGWPKNVLHWAGIDESVADLHNAFSNHFAIVDGIVGMEGN GPIQGTPKPVGVLVAGKDPVAVDATCCRIMKIDPMRIRYLQLALGGSASAILEENIAQLGETIQSVSNAFELIPEFRRLR LENS
Sequences:
>Translated_324_residues MTKQLTRRELLTAMAGGAVLTGCGVEERQVASAPVSIVRAPAYDNAVYDTMLRLLKPLVGDVRGRNILLKPNLVEFEPGT CINTHPLVVHAAYEAFLKMGAASVRIAEGPGHRRNTLDLAEAAGYFRTVPAFEENFTDLNLDEVTRVRPAGQFSRIKKLY LPNSALRADLLVSIAKMKTHHWVGTTLSMKNLFGVVPSGIYGWPKNVLHWAGIDESVADLHNAFSNHFAIVDGIVGMEGN GPIQGTPKPVGVLVAGKDPVAVDATCCRIMKIDPMRIRYLQLALGGSASAILEENIAQLGETIQSVSNAFELIPEFRRLR LENS >Mature_323_residues TKQLTRRELLTAMAGGAVLTGCGVEERQVASAPVSIVRAPAYDNAVYDTMLRLLKPLVGDVRGRNILLKPNLVEFEPGTC INTHPLVVHAAYEAFLKMGAASVRIAEGPGHRRNTLDLAEAAGYFRTVPAFEENFTDLNLDEVTRVRPAGQFSRIKKLYL PNSALRADLLVSIAKMKTHHWVGTTLSMKNLFGVVPSGIYGWPKNVLHWAGIDESVADLHNAFSNHFAIVDGIVGMEGNG PIQGTPKPVGVLVAGKDPVAVDATCCRIMKIDPMRIRYLQLALGGSASAILEENIAQLGETIQSVSNAFELIPEFRRLRL ENS
Specific function: Unknown
COG id: COG2006
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007160 [H]
Pfam domain/function: PF04015 DUF362 [H]
EC number: NA
Molecular weight: Translated: 35249; Mature: 35118
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQLTRRELLTAMAGGAVLTGCGVEERQVASAPVSIVRAPAYDNAVYDTMLRLLKPLVG CCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHH DVRGRNILLKPNLVEFEPGTCINTHPLVVHAAYEAFLKMGAASVRIAEGPGHRRNTLDLA HCCCCEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH EAAGYFRTVPAFEENFTDLNLDEVTRVRPAGQFSRIKKLYLPNSALRADLLVSIAKMKTH HHCCHHHCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HWVGTTLSMKNLFGVVPSGIYGWPKNVLHWAGIDESVADLHNAFSNHFAIVDGIVGMEGN HHCCCEEEHHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCEEEECCEEECCCC GPIQGTPKPVGVLVAGKDPVAVDATCCRIMKIDPMRIRYLQLALGGSASAILEENIAQLG CCCCCCCCCEEEEEECCCCCEEHHHHHEEEECCCHHEEEEEEEECCCHHHHHHHHHHHHH ETIQSVSNAFELIPEFRRLRLENS HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKQLTRRELLTAMAGGAVLTGCGVEERQVASAPVSIVRAPAYDNAVYDTMLRLLKPLVG CCHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHH DVRGRNILLKPNLVEFEPGTCINTHPLVVHAAYEAFLKMGAASVRIAEGPGHRRNTLDLA HCCCCEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH EAAGYFRTVPAFEENFTDLNLDEVTRVRPAGQFSRIKKLYLPNSALRADLLVSIAKMKTH HHCCHHHCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HWVGTTLSMKNLFGVVPSGIYGWPKNVLHWAGIDESVADLHNAFSNHFAIVDGIVGMEGN HHCCCEEEHHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCEEEECCEEECCCC GPIQGTPKPVGVLVAGKDPVAVDATCCRIMKIDPMRIRYLQLALGGSASAILEENIAQLG CCCCCCCCCEEEEEECCCCCEEHHHHHEEEECCCHHEEEEEEEECCCHHHHHHHHHHHHH ETIQSVSNAFELIPEFRRLRLENS HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]