| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620530
Identifier: 116620530
GI number: 116620530
Start: 1733865
End: 1735538
Strand: Direct
Name: 116620530
Synonym: Acid_1408
Alternate gene names: NA
Gene position: 1733865-1735538 (Clockwise)
Preceding gene: 116620529
Following gene: 116620531
Centisome position: 17.4
GC content: 60.16
Gene sequence:
>1674_bases ATGGAAGCGCGTTCCCAATTCGCGGTCAAGCTGTTGCCGTCCCTGGCCGACTTCGCCTTCCTGATGCCCATGGTCTTTCT ATTCGGACGCATGGATGGAGTGAAGACGCTGCTCGGCGATTGCGACACCGGCTGGCACATCCGCACGGGCGAGTGGATTC TGGCTAACGGCTGGGTCCCGACGCGCGACATGTTCTCCTTCTCTAAGCCGGGCGCACCCTGGTACGCCTGGGAATGGCTA AGCGACATTGTCCTCGCCAGGCTCAATGCGGTCGGCGGCTTGCAGGCGGTGGTGATGTTCACCATCCTCCTGATCTCGGT CACCTTCATGGGCCTTTTTCTTCTGGTCCGCCGCAAGGCCAATCCGATCGTGGCGATCGCGGTGACGATGCTGGCGGCGG CCGCCTCCTCGATTCACTGGCTGGCGCGCCCGCATTTGTTCACGCTCTTTTTCATGGTGGTTTTCTACGCCGCGCTCGAG CAGGTTCGCGAAGGCCGAACCCGAATCCTCGGACTGCCCATTCTGGCTGCTCTGCCGCTGATTACGGTTTTGTGGACCAA TCTGCACGGCGGCTTCTTCGTCGGCGCGCTCATGATCGCGGCGTACGGCGGCGGCGAAATCCTGCGGCTCCTGTTTTCGG CATCCGCGGAAGATCGCGGCCCGGCCCTGCTGCGCGCACGCGCCTACTTCCTTTCCGCGTTGGCCTGCTTCACGGCGAGC CTCGCAAATCCGTACACCTATCACCTGCACGTGCACATGGCGCAATACCTGCGCGACCCCTGGAATTCTCAGCACATTAT GGAATTCCTTTCGCCGAGCTTCCATCACCCCACCGCGATTTTCTTCGAGCTCATGCTCGTGATGGCCGTGATCACTTCCG TATCGAACGTGAGGAACGGCCAATTCACCGAGGCCTTGCTGATGCTGGTCTGGGCGCACGGCGGATTGCTGGCGGCGCGC AACATTCCTATCTTCATGATCGCCGCCGCTCCTCCGGTGGCGGCCTGCTTCCAACAATGGCTGCTGCGGCTCCCCGGGAG TTCCGTAGCCGCCTGGCTGCGTTCCGCGGCCGACAAGTTTAATCGCGTAGCCGAAGAGACGGGGCAAACCGATTCAATCG CCCGGCTACACCTGGTCAGCATACTCGGCCTCGTGTTGGTCGCTGCGCTGGTCTTCGCTCCCCATCCGCCCAAAAAATTC CGCGCCGAGTTTGATCCAAAATCTTATCCGGCGGCGGCGCTCGCGACGCTGCGTAGCGACCCTTCGGCGCGCGTCTTCAC CCATGACGAATGGGGTGACTATCTCATTTACAAGCTCTCCAAAACCCACAAGGTCTTTGTGGACGGCCGTAGCGATTTCT ATGGCGACGATTTCGAAGAAAAATATGTAGACGTTCTGAATGTGAAGTACGGCTGGCAAAAGACGCTGGCCGGCTTCGGC GTCGATACCATTCTTATGCCCCCCAACGCGCCGCTGACGGGTGCGTTGAAGGAATCCAGCAACTGGCGCGTCGTCTACGA CGATGGCATCTCGCTGGTTTTCCGGTCGCAGCAAAAGACCGTAGGCACTCAAGTTTCCGCCGCAAATACCGGTGGCGGAG CTGGCCGTGATCGCAAGGTCACGAAAACCGAGGCAAGTGATCACGCGATCACAGAAACCAAACCCAAAACTTAG
Upstream 100 bases:
>100_bases TGCGGGTTAATTATATGGACTTCCGGTCATTTCATGATCGGATCCGTGCTTTTGAAGCCATGCAGCCGGTCGCAAATTCC TGGATGGCTTAAGTATAAAA
Downstream 100 bases:
>100_bases GAGCGAACAAAATGACGTTTTTGCGCAATCTGTGGAATGAAGAACAGGGCCAGGATCTTATCGAATACACCCTGCTGATG GCGTTCGTGGCGTTGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MEARSQFAVKLLPSLADFAFLMPMVFLFGRMDGVKTLLGDCDTGWHIRTGEWILANGWVPTRDMFSFSKPGAPWYAWEWL SDIVLARLNAVGGLQAVVMFTILLISVTFMGLFLLVRRKANPIVAIAVTMLAAAASSIHWLARPHLFTLFFMVVFYAALE QVREGRTRILGLPILAALPLITVLWTNLHGGFFVGALMIAAYGGGEILRLLFSASAEDRGPALLRARAYFLSALACFTAS LANPYTYHLHVHMAQYLRDPWNSQHIMEFLSPSFHHPTAIFFELMLVMAVITSVSNVRNGQFTEALLMLVWAHGGLLAAR NIPIFMIAAAPPVAACFQQWLLRLPGSSVAAWLRSAADKFNRVAEETGQTDSIARLHLVSILGLVLVAALVFAPHPPKKF RAEFDPKSYPAAALATLRSDPSARVFTHDEWGDYLIYKLSKTHKVFVDGRSDFYGDDFEEKYVDVLNVKYGWQKTLAGFG VDTILMPPNAPLTGALKESSNWRVVYDDGISLVFRSQQKTVGTQVSAANTGGGAGRDRKVTKTEASDHAITETKPKT
Sequences:
>Translated_557_residues MEARSQFAVKLLPSLADFAFLMPMVFLFGRMDGVKTLLGDCDTGWHIRTGEWILANGWVPTRDMFSFSKPGAPWYAWEWL SDIVLARLNAVGGLQAVVMFTILLISVTFMGLFLLVRRKANPIVAIAVTMLAAAASSIHWLARPHLFTLFFMVVFYAALE QVREGRTRILGLPILAALPLITVLWTNLHGGFFVGALMIAAYGGGEILRLLFSASAEDRGPALLRARAYFLSALACFTAS LANPYTYHLHVHMAQYLRDPWNSQHIMEFLSPSFHHPTAIFFELMLVMAVITSVSNVRNGQFTEALLMLVWAHGGLLAAR NIPIFMIAAAPPVAACFQQWLLRLPGSSVAAWLRSAADKFNRVAEETGQTDSIARLHLVSILGLVLVAALVFAPHPPKKF RAEFDPKSYPAAALATLRSDPSARVFTHDEWGDYLIYKLSKTHKVFVDGRSDFYGDDFEEKYVDVLNVKYGWQKTLAGFG VDTILMPPNAPLTGALKESSNWRVVYDDGISLVFRSQQKTVGTQVSAANTGGGAGRDRKVTKTEASDHAITETKPKT >Mature_557_residues MEARSQFAVKLLPSLADFAFLMPMVFLFGRMDGVKTLLGDCDTGWHIRTGEWILANGWVPTRDMFSFSKPGAPWYAWEWL SDIVLARLNAVGGLQAVVMFTILLISVTFMGLFLLVRRKANPIVAIAVTMLAAAASSIHWLARPHLFTLFFMVVFYAALE QVREGRTRILGLPILAALPLITVLWTNLHGGFFVGALMIAAYGGGEILRLLFSASAEDRGPALLRARAYFLSALACFTAS LANPYTYHLHVHMAQYLRDPWNSQHIMEFLSPSFHHPTAIFFELMLVMAVITSVSNVRNGQFTEALLMLVWAHGGLLAAR NIPIFMIAAAPPVAACFQQWLLRLPGSSVAAWLRSAADKFNRVAEETGQTDSIARLHLVSILGLVLVAALVFAPHPPKKF RAEFDPKSYPAAALATLRSDPSARVFTHDEWGDYLIYKLSKTHKVFVDGRSDFYGDDFEEKYVDVLNVKYGWQKTLAGFG VDTILMPPNAPLTGALKESSNWRVVYDDGISLVFRSQQKTVGTQVSAANTGGGAGRDRKVTKTEASDHAITETKPKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61543; Mature: 61543
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEARSQFAVKLLPSLADFAFLMPMVFLFGRMDGVKTLLGDCDTGWHIRTGEWILANGWVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCEEEECCCCC TRDMFSFSKPGAPWYAWEWLSDIVLARLNAVGGLQAVVMFTILLISVTFMGLFLLVRRKA CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPIVAIAVTMLAAAASSIHWLARPHLFTLFFMVVFYAALEQVREGRTRILGLPILAALPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH ITVLWTNLHGGFFVGALMIAAYGGGEILRLLFSASAEDRGPALLRARAYFLSALACFTAS HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LANPYTYHLHVHMAQYLRDPWNSQHIMEFLSPSFHHPTAIFFELMLVMAVITSVSNVRNG HCCCEEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC QFTEALLMLVWAHGGLLAARNIPIFMIAAAPPVAACFQQWLLRLPGSSVAAWLRSAADKF HHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NRVAEETGQTDSIARLHLVSILGLVLVAALVFAPHPPKKFRAEFDPKSYPAAALATLRSD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCC PSARVFTHDEWGDYLIYKLSKTHKVFVDGRSDFYGDDFEEKYVDVLNVKYGWQKTLAGFG CCCEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCC VDTILMPPNAPLTGALKESSNWRVVYDDGISLVFRSQQKTVGTQVSAANTGGGAGRDRKV CCEEEECCCCCCCCHHCCCCCCEEEEECCCEEEEECCHHHHCCEEECCCCCCCCCCCCCC TKTEASDHAITETKPKT CCCCCCCCCCCCCCCCC >Mature Secondary Structure MEARSQFAVKLLPSLADFAFLMPMVFLFGRMDGVKTLLGDCDTGWHIRTGEWILANGWVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCEEEECCCCC TRDMFSFSKPGAPWYAWEWLSDIVLARLNAVGGLQAVVMFTILLISVTFMGLFLLVRRKA CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPIVAIAVTMLAAAASSIHWLARPHLFTLFFMVVFYAALEQVREGRTRILGLPILAALPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH ITVLWTNLHGGFFVGALMIAAYGGGEILRLLFSASAEDRGPALLRARAYFLSALACFTAS HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LANPYTYHLHVHMAQYLRDPWNSQHIMEFLSPSFHHPTAIFFELMLVMAVITSVSNVRNG HCCCEEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC QFTEALLMLVWAHGGLLAARNIPIFMIAAAPPVAACFQQWLLRLPGSSVAAWLRSAADKF HHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NRVAEETGQTDSIARLHLVSILGLVLVAALVFAPHPPKKFRAEFDPKSYPAAALATLRSD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCC PSARVFTHDEWGDYLIYKLSKTHKVFVDGRSDFYGDDFEEKYVDVLNVKYGWQKTLAGFG CCCEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCC VDTILMPPNAPLTGALKESSNWRVVYDDGISLVFRSQQKTVGTQVSAANTGGGAGRDRKV CCEEEECCCCCCCCHHCCCCCCEEEEECCCEEEEECCHHHHCCEEECCCCCCCCCCCCCC TKTEASDHAITETKPKT CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA