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The map label for this gene is 116620515

Identifier: 116620515

GI number: 116620515

Start: 1721171

End: 1721785

Strand: Reverse

Name: 116620515

Synonym: Acid_1393

Alternate gene names: NA

Gene position: 1721785-1721171 (Counterclockwise)

Preceding gene: 116620516

Following gene: 116620513

Centisome position: 17.28

GC content: 61.46

Gene sequence:

>615_bases
ATGGGCGCCTCCGCATTAATTCCCGTAAAGTTATCCTGGCAGTCGCTCCACGATGCCGCCGGCGGGTGCAAGGCCTGTCA
CCTTTGGGAGCACGCCACCCAGACGGTCTTCGGTGAAGGCAAGTCTCATGCTCCGCTGATGCTGGTCGGCGAACAACCGG
GGAACGAAGAGGACCTCGCCGGCCATCCCTTCGTTGGCCCTGCCGGGCGTCTTCTGGATGATGCGCTGGAGGCCGCCGGC
ATCGATCGCAAGCAGGCGTACGTCACCAACGTCGTGAAGCATTTCAAGTGGGAGCCGCGCGGCAAGCGGCGCATCCACGC
CAAGCCCACCACGGCGGAGATTACGGCCTGCATTCCCTGGCTTACCGCGGAATTGGAATTGGTCAAGCCGCGCATTTTGA
TCTGCCTGGGAGCTACCGCCGCCCAAGCTTTGCTCGGCCGTACCTTCCGTGTCACCAAGCAACGAGGCAAACTCGTGGAA
TCAAAGCTCGCCCCTTACGTGATGGCGACGGTTCACCCATCCTCCATTCTCCGCGCTCCCGATGCAGACGCTCGCCACGC
CGAAATGCAGAGCTTCATCGCCGACTTAAAGTCCGCGGCGAAGATTTTGGCTTAA

Upstream 100 bases:

>100_bases
GCCGCGACCGTAAAGTAAGGGAGCGACCTGCTTCATCTGCGCCCGATAGTGGTGCGCCCGAGGACAGACGCCGCCGCCTT
CCTGCCTGGACAATCGAAAT

Downstream 100 bases:

>100_bases
AGGATTACGTGCGGCCGAGGAAGCTGACCTGTGCGCGGAGATTGGAGACGCCGGCGGTGTATCGGGTGTCGCTAACGCTG
AAGGCCACGGCGTCTTCGAG

Product: Fis family transcriptional regulator

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage DNA Polymerase; DNA-Directed DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; Uracil DNA Glycosylase Protein; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage SPO1 DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MGASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLAGHPFVGPAGRLLDDALEAAG
IDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPWLTAELELVKPRILICLGATAAQALLGRTFRVTKQRGKLVE
SKLAPYVMATVHPSSILRAPDADARHAEMQSFIADLKSAAKILA

Sequences:

>Translated_204_residues
MGASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLAGHPFVGPAGRLLDDALEAAG
IDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPWLTAELELVKPRILICLGATAAQALLGRTFRVTKQRGKLVE
SKLAPYVMATVHPSSILRAPDADARHAEMQSFIADLKSAAKILA
>Mature_203_residues
GASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLAGHPFVGPAGRLLDDALEAAGI
DRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPWLTAELELVKPRILICLGATAAQALLGRTFRVTKQRGKLVES
KLAPYVMATVHPSSILRAPDADARHAEMQSFIADLKSAAKILA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22036; Mature: 21905

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLA
CCCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
GHPFVGPAGRLLDDALEAAGIDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPW
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH
LTAELELVKPRILICLGATAAQALLGRTFRVTKQRGKLVESKLAPYVMATVHPSSILRAP
HHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC
DADARHAEMQSFIADLKSAAKILA
CCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLA
CCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
GHPFVGPAGRLLDDALEAAGIDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPW
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH
LTAELELVKPRILICLGATAAQALLGRTFRVTKQRGKLVESKLAPYVMATVHPSSILRAP
HHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC
DADARHAEMQSFIADLKSAAKILA
CCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA