| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620502
Identifier: 116620502
GI number: 116620502
Start: 1703114
End: 1704265
Strand: Direct
Name: 116620502
Synonym: Acid_1380
Alternate gene names: NA
Gene position: 1703114-1704265 (Clockwise)
Preceding gene: 116620500
Following gene: 116620505
Centisome position: 17.09
GC content: 61.28
Gene sequence:
>1152_bases ATGTACAATCAAAAGCAAATGCAGACATCGGAGTCCGAAAATATCTACCGGCGGCTCCAGCGGCATCTGGACCGCATGCC AGTGGCGTTTCCGGCGACGCCGTCAGGCGTTGAGTTGCGCATTTTGCAGCGGCTGTTTACGCCGGAAGAGGCCGGGATCG CACTCGAGCTGAGCGCCATTCCCGAGCCTGCCGCCAACATTCACAAGCGCTTCGGTTCGCGCATCACGCTCGAGAAGTTG TGCGGGGAGCTCGAGCACATGGCGTCCAAAGGCACGATTCTCGCCTTCCCGGTGGCGGGCGAGATGCGATACGGCAAGAT GATATTTGCCATCGGCATGTACGAACGCCAGTTGAAAACCCTCACGCCAGAGTTCGAGCACGAGAGCCGCCAGTATTTCG ACGAGGCATTCGGAGCGGCATTTCACACCGGCAAGACCACGCAGCTTCGCATCGTGCCGGTGAACAAGCAGATTGCCGTG GAGCGTGGCGTCAGCACCTATGACCGCATTCGCGCGCACATCGAGCAGTCGCCCGGTCCCTTCGGAACACTGCGCTGCAT CTGCCGGCATGGTCACGATCTGCTCGATCAGCCATGCACTCGGACCAAGCTTCGCGACAACTGCCTGATGATCGGGCCGG CGGCGCAGTGGGCGGTGGATTCCGGCAGTGGGCGGGCCGTGACCCGCGAGGAGATGCTGGATCTACTCGATTGCGCGGAC CGCGATGGCCTGGTGCTACAGCCCGAAAATACCAAGTCTCCGATGTTCGTGTGCTGTTGCTGCGGCTGCTGCTGCGGCGT GCTCCACTCCGCCAAACGTTTGCCGCGCCCTGCGGATTTCTTCAGCACGAACTTCTATGCCGCAGTCGATGACGCAGCCT GCGAGAGTTGCGGCGCTTGCGAAATGCGCTGCCAGATGGATGCCATCACCAGTCCCGAAGGCAAGGCAGTGGTGGACCGC GCGCGCTGCATCGGCTGTGCCTTGTGCGTCAGCACTTGTCCGAGCGGAGCGCTACGTCTGGAAGCGCTTGGCCATCTCGT GGATCCGCCCGACGACACCAAGGCGCTATACCTTAGGATGTTCCAAGAGCGCTATGGCCGCTGGGGTCTGGCGAAGCTCG GTGCTCGAAAACTGCTCGGTATGAAGATTTAG
Upstream 100 bases:
>100_bases GGTGCCACTGTGGATTGTTGGGAAGGGGTATTCATCGACTGGTGCCGAGTGCTCCACTGTACCAAGTCCCGGCCTGGAAA ACAACGAACGCCAATGTACG
Downstream 100 bases:
>100_bases GCGATTTGCCCATCCTCAAACCGGATGGTGCGCATCAGCGTGCGCCGTACCGGGCAGGCATTCGCAACGCGCAGCAGCCT CGATCGCTGCTGCGGTGTGA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; 4Fe-4S Ferredoxin
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MYNQKQMQTSESENIYRRLQRHLDRMPVAFPATPSGVELRILQRLFTPEEAGIALELSAIPEPAANIHKRFGSRITLEKL CGELEHMASKGTILAFPVAGEMRYGKMIFAIGMYERQLKTLTPEFEHESRQYFDEAFGAAFHTGKTTQLRIVPVNKQIAV ERGVSTYDRIRAHIEQSPGPFGTLRCICRHGHDLLDQPCTRTKLRDNCLMIGPAAQWAVDSGSGRAVTREEMLDLLDCAD RDGLVLQPENTKSPMFVCCCCGCCCGVLHSAKRLPRPADFFSTNFYAAVDDAACESCGACEMRCQMDAITSPEGKAVVDR ARCIGCALCVSTCPSGALRLEALGHLVDPPDDTKALYLRMFQERYGRWGLAKLGARKLLGMKI
Sequences:
>Translated_383_residues MYNQKQMQTSESENIYRRLQRHLDRMPVAFPATPSGVELRILQRLFTPEEAGIALELSAIPEPAANIHKRFGSRITLEKL CGELEHMASKGTILAFPVAGEMRYGKMIFAIGMYERQLKTLTPEFEHESRQYFDEAFGAAFHTGKTTQLRIVPVNKQIAV ERGVSTYDRIRAHIEQSPGPFGTLRCICRHGHDLLDQPCTRTKLRDNCLMIGPAAQWAVDSGSGRAVTREEMLDLLDCAD RDGLVLQPENTKSPMFVCCCCGCCCGVLHSAKRLPRPADFFSTNFYAAVDDAACESCGACEMRCQMDAITSPEGKAVVDR ARCIGCALCVSTCPSGALRLEALGHLVDPPDDTKALYLRMFQERYGRWGLAKLGARKLLGMKI >Mature_383_residues MYNQKQMQTSESENIYRRLQRHLDRMPVAFPATPSGVELRILQRLFTPEEAGIALELSAIPEPAANIHKRFGSRITLEKL CGELEHMASKGTILAFPVAGEMRYGKMIFAIGMYERQLKTLTPEFEHESRQYFDEAFGAAFHTGKTTQLRIVPVNKQIAV ERGVSTYDRIRAHIEQSPGPFGTLRCICRHGHDLLDQPCTRTKLRDNCLMIGPAAQWAVDSGSGRAVTREEMLDLLDCAD RDGLVLQPENTKSPMFVCCCCGCCCGVLHSAKRLPRPADFFSTNFYAAVDDAACESCGACEMRCQMDAITSPEGKAVVDR ARCIGCALCVSTCPSGALRLEALGHLVDPPDDTKALYLRMFQERYGRWGLAKLGARKLLGMKI
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42577; Mature: 42577
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNQKQMQTSESENIYRRLQRHLDRMPVAFPATPSGVELRILQRLFTPEEAGIALELSAI CCCHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCC PEPAANIHKRFGSRITLEKLCGELEHMASKGTILAFPVAGEMRYGKMIFAIGMYERQLKT CCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHH LTPEFEHESRQYFDEAFGAAFHTGKTTQLRIVPVNKQIAVERGVSTYDRIRAHIEQSPGP CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHHCCCCC FGTLRCICRHGHDLLDQPCTRTKLRDNCLMIGPAAQWAVDSGSGRAVTREEMLDLLDCAD HHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECCCHHHEEECCCCCEECHHHHHHHHHHCC RDGLVLQPENTKSPMFVCCCCGCCCGVLHSAKRLPRPADFFSTNFYAAVDDAACESCGAC CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEECHHHHHCCCCC EMRCQMDAITSPEGKAVVDRARCIGCALCVSTCPSGALRLEALGHLVDPPDDTKALYLRM HHEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHH FQERYGRWGLAKLGARKLLGMKI HHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MYNQKQMQTSESENIYRRLQRHLDRMPVAFPATPSGVELRILQRLFTPEEAGIALELSAI CCCHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCC PEPAANIHKRFGSRITLEKLCGELEHMASKGTILAFPVAGEMRYGKMIFAIGMYERQLKT CCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHH LTPEFEHESRQYFDEAFGAAFHTGKTTQLRIVPVNKQIAVERGVSTYDRIRAHIEQSPGP CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHHCCCCC FGTLRCICRHGHDLLDQPCTRTKLRDNCLMIGPAAQWAVDSGSGRAVTREEMLDLLDCAD HHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECCCHHHEEECCCCCEECHHHHHHHHHHCC RDGLVLQPENTKSPMFVCCCCGCCCGVLHSAKRLPRPADFFSTNFYAAVDDAACESCGAC CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEECHHHHHCCCCC EMRCQMDAITSPEGKAVVDRARCIGCALCVSTCPSGALRLEALGHLVDPPDDTKALYLRM HHEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHH FQERYGRWGLAKLGARKLLGMKI HHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA