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The map label for this gene is yfbG [C]

Identifier: 116620493

GI number: 116620493

Start: 1688860

End: 1689801

Strand: Reverse

Name: yfbG [C]

Synonym: Acid_1371

Alternate gene names: 116620493

Gene position: 1689801-1688860 (Counterclockwise)

Preceding gene: 116620497

Following gene: 116620492

Centisome position: 16.96

GC content: 61.25

Gene sequence:

>942_bases
TTGCGGATCGTCGTTTCCGGCTCTGCCGGCTTTGTTGGGTCGCACATGTGCGAGCGCCTGTTGAATGAAGGCCACAGCGT
AGTTGCACTCGATAATTTTTTGACAGGCTCCCCGGCCAACCTGGCCCACCTGGAGAAGCACCCCCGTCTACAATTCGTGG
AGCAGGACATCACCCGCCCATTTACCGTGGATGGTGCGGTGGATTGCGTGGTCAACATGGCCTCGCCCGCCAGTCCCAAG
GACTACCTGGAGTACCCCATTGAAACCCTCGACGTCGGCTCCATCGGCAGCCGCAACATGCTCGAACTCGCACTGGCGAA
GGGTGCCCGTTACCTGGTCACCTCCACCAGCGAGTGCTACGGCGACCCGATGGTCCATCCGCAGGTGGAGACGTATTGGG
GCAATGTGAACCCGGTTGGCCCCCGCTCCTGCTACGACGAAAGCAAACGCTTCGCCGAAGCCATCACGATGGCTTACCAC
CGCAAGCACGGCGTGCGCACCAATATCGCGCGAATTTTCAATACCTACGGCCCGCGCATGAAGCTGGATGACGGCCGTGT
GGTGCCGGCATTCCTCGATCAGGCGCTGCGCGGCGAGCCCATGACGGTCTTCGGGACCGGCTCGCAGACGCGCAGTTTCT
GCTACGTCAGCGATCTGGTGGACGGTCTCTACCGGCTCATGCAGTCCGATGAGCGCTATCCCGTCAACCTCGGCAACCCA
CGCGAAATGACGATTCTCGAGTTCGCCGAGCACATCCGCGCCATGACGGGCACCAAATCCGAGATTATCTTTCACCCCCT
GCCGGAAGACGATCCCAAGCAGCGCAAGCCCGACATTACAAAGGCGCGCAGCGTCCTCGGCTGGGAGCCGCGCATTTCGC
TCGAAGATGGATTGCGCGATACGGTCGAGTACTTCCGCGGCATTCAGGCAACCCACGCGTGA

Upstream 100 bases:

>100_bases
AGTGCTCGCTCCACCCAGGATGCGTCGCTCATAGACTCATTTTGACTGTAGCATGTGAACCCCCGCCCGCCTCCGCTAGA
ATAAAGACCTGGAGGGACTT

Downstream 100 bases:

>100_bases
AACGCCGGGGATTTCCGGAGCGTCTTCTCGTTCTAGGTGTCCCTTGGGTGTCTACAGGAAACATATCGAAGCCTTCCGGA
GGAAGTTCGGCCGTGAGATG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLTGSPANLAHLEKHPRLQFVEQDITRPFTVDGAVDCVVNMASPASPK
DYLEYPIETLDVGSIGSRNMLELALAKGARYLVTSTSECYGDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYH
RKHGVRTNIARIFNTYGPRMKLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGLYRLMQSDERYPVNLGNP
REMTILEFAEHIRAMTGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRDTVEYFRGIQATHA

Sequences:

>Translated_313_residues
MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLTGSPANLAHLEKHPRLQFVEQDITRPFTVDGAVDCVVNMASPASPK
DYLEYPIETLDVGSIGSRNMLELALAKGARYLVTSTSECYGDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYH
RKHGVRTNIARIFNTYGPRMKLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGLYRLMQSDERYPVNLGNP
REMTILEFAEHIRAMTGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRDTVEYFRGIQATHA
>Mature_313_residues
MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLTGSPANLAHLEKHPRLQFVEQDITRPFTVDGAVDCVVNMASPASPK
DYLEYPIETLDVGSIGSRNMLELALAKGARYLVTSTSECYGDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYH
RKHGVRTNIARIFNTYGPRMKLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGLYRLMQSDERYPVNLGNP
REMTILEFAEHIRAMTGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRDTVEYFRGIQATHA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=305, Percent_Identity=54.4262295081967, Blast_Score=359, Evalue=2e-99,
Organism=Homo sapiens, GI7657641, Length=323, Percent_Identity=24.4582043343653, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI4507709, Length=316, Percent_Identity=23.4177215189873, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1788589, Length=345, Percent_Identity=26.6666666666667, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI48994969, Length=335, Percent_Identity=26.865671641791, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786974, Length=335, Percent_Identity=26.865671641791, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=26.0355029585799, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788366, Length=347, Percent_Identity=23.342939481268, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=307, Percent_Identity=50.4885993485342, Blast_Score=337, Evalue=4e-93,
Organism=Caenorhabditis elegans, GI17568069, Length=334, Percent_Identity=26.0479041916168, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI115532424, Length=331, Percent_Identity=27.7945619335347, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17507723, Length=340, Percent_Identity=21.1764705882353, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356223, Length=306, Percent_Identity=51.9607843137255, Blast_Score=340, Evalue=6e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35012; Mature: 35012

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLTGSPANLAHLEKHPRLQFVEQDITRP
CEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCHHHHHHHCCCC
FTVDGAVDCVVNMASPASPKDYLEYPIETLDVGSIGSRNMLELALAKGARYLVTSTSECY
EEECCHHHHHEECCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCEEEEECCHHHC
GDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYHRKHGVRTNIARIFNTYGPRM
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCE
KLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGLYRLMQSDERYPVNLGNP
ECCCCEECHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
REMTILEFAEHIRAMTGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRD
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHH
TVEYFRGIQATHA
HHHHHHHHHHCCC
>Mature Secondary Structure
MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLTGSPANLAHLEKHPRLQFVEQDITRP
CEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCHHHHHHHCCCC
FTVDGAVDCVVNMASPASPKDYLEYPIETLDVGSIGSRNMLELALAKGARYLVTSTSECY
EEECCHHHHHEECCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCEEEEECCHHHC
GDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYHRKHGVRTNIARIFNTYGPRM
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCE
KLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGLYRLMQSDERYPVNLGNP
ECCCCEECHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
REMTILEFAEHIRAMTGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRD
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHH
TVEYFRGIQATHA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]