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The map label for this gene is tolR [H]

Identifier: 116620405

GI number: 116620405

Start: 1580626

End: 1581105

Strand: Direct

Name: tolR [H]

Synonym: Acid_1282

Alternate gene names: 116620405

Gene position: 1580626-1581105 (Clockwise)

Preceding gene: 116620404

Following gene: 116620406

Centisome position: 15.86

GC content: 58.96

Gene sequence:

>480_bases
ATGGCAAGAACAGGACTCAAGAAACATACGGCGCCGGCGGCGATTGCCGATATCAACGTCACTCCGATGGTGGACGTGAT
GCTGGTGATGCTCATCATCTTCATGGTCATCACGCCGATGTTGTCGAAGGGCGTAAGCGTCGATCTGGTGAAGACCCAGC
ATCCCATCTCGATGCAGGCGGCTGACAAGAGCGATGCGATCGTCTGCGCGATCACGCGCGACGGCAAAACGTATCTTAAT
ACCACCCAGATGGCTCCGGAAGATCTTCCCGCCAAAGTGAAGGATCTGCTCGCGAACCGTTTGGACAAGACCGTATTCGT
AAAGGCCGATTCTCGGGCGCGCTACGAACGAGTGGTGGATGTGGTGGACAACCTGCGCGCGGCCGGCGTGGACCAGTTGG
GTCTGCTGACGGAACAAGTGCAGGAAGGCGGCAAGGGCAAAGAAGGCGCGCCGGCAGCAGCACCGCCGGCCGGACAGTAA

Upstream 100 bases:

>100_bases
CTCCAGCGGGTAACCGCTGGTATTTGGGTTCCGGTGAGTTGATTGAGGGGAGTTCCGCGAGGCGCTCCCCTGCTTCTACC
CCGCACCTCTGGAGAGAACG

Downstream 100 bases:

>100_bases
CGAATTCGAAGTTTTATTAAAGGAGCAATCTTATGGGAATGTCCGTCGGCGGGGCCGGTGGTGGTCCAAAAGCTGATATC
AACATGACGCCCATGATCGA

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MARTGLKKHTAPAAIADINVTPMVDVMLVMLIIFMVITPMLSKGVSVDLVKTQHPISMQAADKSDAIVCAITRDGKTYLN
TTQMAPEDLPAKVKDLLANRLDKTVFVKADSRARYERVVDVVDNLRAAGVDQLGLLTEQVQEGGKGKEGAPAAAPPAGQ

Sequences:

>Translated_159_residues
MARTGLKKHTAPAAIADINVTPMVDVMLVMLIIFMVITPMLSKGVSVDLVKTQHPISMQAADKSDAIVCAITRDGKTYLN
TTQMAPEDLPAKVKDLLANRLDKTVFVKADSRARYERVVDVVDNLRAAGVDQLGLLTEQVQEGGKGKEGAPAAAPPAGQ
>Mature_158_residues
ARTGLKKHTAPAAIADINVTPMVDVMLVMLIIFMVITPMLSKGVSVDLVKTQHPISMQAADKSDAIVCAITRDGKTYLNT
TQMAPEDLPAKVKDLLANRLDKTVFVKADSRARYERVVDVVDNLRAAGVDQLGLLTEQVQEGGKGKEGAPAAAPPAGQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=123, Percent_Identity=32.520325203252, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16951; Mature: 16820

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTGLKKHTAPAAIADINVTPMVDVMLVMLIIFMVITPMLSKGVSVDLVKTQHPISMQA
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEC
ADKSDAIVCAITRDGKTYLNTTQMAPEDLPAKVKDLLANRLDKTVFVKADSRARYERVVD
CCCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
VVDNLRAAGVDQLGLLTEQVQEGGKGKEGAPAAAPPAGQ
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTGLKKHTAPAAIADINVTPMVDVMLVMLIIFMVITPMLSKGVSVDLVKTQHPISMQA
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEC
ADKSDAIVCAITRDGKTYLNTTQMAPEDLPAKVKDLLANRLDKTVFVKADSRARYERVVD
CCCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
VVDNLRAAGVDQLGLLTEQVQEGGKGKEGAPAAAPPAGQ
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]