Click here to switch to the map view.

The map label for this gene is yvfS [H]

Identifier: 116620397

GI number: 116620397

Start: 1572417

End: 1573175

Strand: Reverse

Name: yvfS [H]

Synonym: Acid_1274

Alternate gene names: 116620397

Gene position: 1573175-1572417 (Counterclockwise)

Preceding gene: 116620398

Following gene: 116620396

Centisome position: 15.79

GC content: 64.56

Gene sequence:

>759_bases
ATGACCGCACGCATCTATTACCTGGAAGCCCGCAACGAGTTGCTCAAGTTCGCGCGGATGAAGAGCTACGCCATGTCTTC
GATAGTCTTCCCACTGATGTTCTATTGTTTCTTCGGACTCGCTATGAGGTCGCATGAAGCCGCCGCGCCTCCCATGGCGC
GCTACCTGCTCGCCACCTATGGCGCCTTCGCCATCATGGGTTCCACCCTCTACGCTTTCGGGGCCGGCATCGCGATTGAG
CGCGGCCTCGGCTGGCTCGAAGTCAAGCGCGCCAGCCCCATGCCCGCGGGCGCGTACTTCTTCGCCAAGGCGGTAGCCGC
CGTCAGCTTCGGCGCCACTACCATCCTGCTGCTGTTCGCGCTCGGCGCGGCGTTCGGCGGAGTCCGCATGGCGCCCGCGC
AGTGGCTGCTTACCTTCTTCTCGCTCGTCGCCGGCGCCATCCCGTTCTGCGCGCTCGGCCTGATTATCGGCAACCTGGCC
GGAGCCAACTCCGCGCCCGCCACGGTCAATATGGTCTACATGCCCCTGGCATTTTGCGGCGGGCTCTGGCTGCCCTTCGA
TTTCCTTCCGGCGGCCATCCAGCGGGTTGCGCCCCTGCTGCCTTCTTACCACCTGGCGCAGATCGCCCTTGCGATTCAGA
ACGCGCCCGTACACGGCAGCATCGCGGGGCACGTCGAGGCGCTGGCTGCCTTCGCCTGCCTCTTCCTCGGCACCGCCTGG
ATTGCGCAATCCCGTGAACGCGAGAAGATGTATGGTTAA

Upstream 100 bases:

>100_bases
CGCCCGCCGAAATCAAACGGCAAGGCTCGTCAACCGGACTCGAGGACGCATTCCTTTCCCTGGTCCGCAACAACAACCAT
TCGATCGAGGAGGTACTACA

Downstream 100 bases:

>100_bases
AGGCGGCCGCTGATGAAACTCCTCCCCAAAGATCAGGATTGGACGGCGTACACGTATCTCGTGTACCTGATCTACTTTCT
GCTCTATCCATTTCTCGCCG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTARIYYLEARNELLKFARMKSYAMSSIVFPLMFYCFFGLAMRSHEAAAPPMARYLLATYGAFAIMGSTLYAFGAGIAIE
RGLGWLEVKRASPMPAGAYFFAKAVAAVSFGATTILLLFALGAAFGGVRMAPAQWLLTFFSLVAGAIPFCALGLIIGNLA
GANSAPATVNMVYMPLAFCGGLWLPFDFLPAAIQRVAPLLPSYHLAQIALAIQNAPVHGSIAGHVEALAAFACLFLGTAW
IAQSREREKMYG

Sequences:

>Translated_252_residues
MTARIYYLEARNELLKFARMKSYAMSSIVFPLMFYCFFGLAMRSHEAAAPPMARYLLATYGAFAIMGSTLYAFGAGIAIE
RGLGWLEVKRASPMPAGAYFFAKAVAAVSFGATTILLLFALGAAFGGVRMAPAQWLLTFFSLVAGAIPFCALGLIIGNLA
GANSAPATVNMVYMPLAFCGGLWLPFDFLPAAIQRVAPLLPSYHLAQIALAIQNAPVHGSIAGHVEALAAFACLFLGTAW
IAQSREREKMYG
>Mature_251_residues
TARIYYLEARNELLKFARMKSYAMSSIVFPLMFYCFFGLAMRSHEAAAPPMARYLLATYGAFAIMGSTLYAFGAGIAIER
GLGWLEVKRASPMPAGAYFFAKAVAAVSFGATTILLLFALGAAFGGVRMAPAQWLLTFFSLVAGAIPFCALGLIIGNLAG
ANSAPATVNMVYMPLAFCGGLWLPFDFLPAAIQRVAPLLPSYHLAQIALAIQNAPVHGSIAGHVEALAAFACLFLGTAWI
AQSREREKMYG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 26960; Mature: 26829

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARIYYLEARNELLKFARMKSYAMSSIVFPLMFYCFFGLAMRSHEAAAPPMARYLLATY
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAFAIMGSTLYAFGAGIAIERGLGWLEVKRASPMPAGAYFFAKAVAAVSFGATTILLLFA
HHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAAFGGVRMAPAQWLLTFFSLVAGAIPFCALGLIIGNLAGANSAPATVNMVYMPLAFCG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GLWLPFDFLPAAIQRVAPLLPSYHLAQIALAIQNAPVHGSIAGHVEALAAFACLFLGTAW
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IAQSREREKMYG
HHHHHHHHHCCC
>Mature Secondary Structure 
TARIYYLEARNELLKFARMKSYAMSSIVFPLMFYCFFGLAMRSHEAAAPPMARYLLATY
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAFAIMGSTLYAFGAGIAIERGLGWLEVKRASPMPAGAYFFAKAVAAVSFGATTILLLFA
HHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAAFGGVRMAPAQWLLTFFSLVAGAIPFCALGLIIGNLAGANSAPATVNMVYMPLAFCG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GLWLPFDFLPAAIQRVAPLLPSYHLAQIALAIQNAPVHGSIAGHVEALAAFACLFLGTAW
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IAQSREREKMYG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]