| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620379
Identifier: 116620379
GI number: 116620379
Start: 1554132
End: 1554728
Strand: Direct
Name: 116620379
Synonym: Acid_1256
Alternate gene names: NA
Gene position: 1554132-1554728 (Clockwise)
Preceding gene: 116620378
Following gene: 116620380
Centisome position: 15.59
GC content: 67.84
Gene sequence:
>597_bases ATGGCAACACCCGCGCAACTGACCGCCAACCGCGCCAACGCGCGACTTTCCACCGGACCTCGCTCCGCCGAGGGCAGGGC CTCTTCCAGCCGTAACTCGCTCAAGTTCGGCCTCACCGCCAAAGCCGCCATCATCCCCGGCGAAGATCCTGCCGCGCTCG AAGGCCTCACAGCCCAATACCTCGAGGAGTTCGACCCCGTCGGCTCCGTCGAAGAGCACCTCGTCCAGGCCCTCATCCGC GCCGTTTGGATGCAGCAGCGCTGTGATCGCATCGAAGCGGCCTACCTCAATGCCCGCGTCGCTGCCTTGCCCGAAGGCAC CGGGCACGCTCTCGGCGTCGCCGTCATTGAGGACGCCGCGCAAGGCGACGTGCTCCACAAGATCTTCCGCCGCCGCCAGG CAGCCGAGCGCGAGTGGAATCGCGCCCTTGATTCCCTCACCCGCATGCAGGGCCAGCGCTTTGCCGATGAAACGGAGGCC GAAGCCACCCTCTCGCCCGCGCCCCCGGCCGTAAATCGGGTTCGTTTTACCGATCCCCCGCAACTCCCCGTGCGGCCCGC CGCCGAACTCCCCGTCAACCTCGCGCTCCGCCTATGA
Upstream 100 bases:
>100_bases ACCCGTTCACACAAACATTTTATTTATTTTTCGCTGATTTCAAAGCCTTTCTCCGCCCAACGCCCCTCCAGCCCCTTGAC GCGGGGTTATACGTGAGCCC
Downstream 100 bases:
>100_bases GTTCCATCAATGACACACAGAGTGGCAACGGGAACACAAGGCTGAGGCATTGAGACCTTCCAGATCAGCCAGGAGGAGTG TGGACTCCAGAATGCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MATPAQLTANRANARLSTGPRSAEGRASSSRNSLKFGLTAKAAIIPGEDPAALEGLTAQYLEEFDPVGSVEEHLVQALIR AVWMQQRCDRIEAAYLNARVAALPEGTGHALGVAVIEDAAQGDVLHKIFRRRQAAEREWNRALDSLTRMQGQRFADETEA EATLSPAPPAVNRVRFTDPPQLPVRPAAELPVNLALRL
Sequences:
>Translated_198_residues MATPAQLTANRANARLSTGPRSAEGRASSSRNSLKFGLTAKAAIIPGEDPAALEGLTAQYLEEFDPVGSVEEHLVQALIR AVWMQQRCDRIEAAYLNARVAALPEGTGHALGVAVIEDAAQGDVLHKIFRRRQAAEREWNRALDSLTRMQGQRFADETEA EATLSPAPPAVNRVRFTDPPQLPVRPAAELPVNLALRL >Mature_197_residues ATPAQLTANRANARLSTGPRSAEGRASSSRNSLKFGLTAKAAIIPGEDPAALEGLTAQYLEEFDPVGSVEEHLVQALIRA VWMQQRCDRIEAAYLNARVAALPEGTGHALGVAVIEDAAQGDVLHKIFRRRQAAEREWNRALDSLTRMQGQRFADETEAE ATLSPAPPAVNRVRFTDPPQLPVRPAAELPVNLALRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21451; Mature: 21319
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPAQLTANRANARLSTGPRSAEGRASSSRNSLKFGLTAKAAIIPGEDPAALEGLTAQY CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCHHHHHHHHHH LEEFDPVGSVEEHLVQALIRAVWMQQRCDRIEAAYLNARVAALPEGTGHALGVAVIEDAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC QGDVLHKIFRRRQAAEREWNRALDSLTRMQGQRFADETEAEATLSPAPPAVNRVRFTDPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCC QLPVRPAAELPVNLALRL CCCCCCCCCCCCEEEEEC >Mature Secondary Structure ATPAQLTANRANARLSTGPRSAEGRASSSRNSLKFGLTAKAAIIPGEDPAALEGLTAQY CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCHHHHHHHHHH LEEFDPVGSVEEHLVQALIRAVWMQQRCDRIEAAYLNARVAALPEGTGHALGVAVIEDAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC QGDVLHKIFRRRQAAEREWNRALDSLTRMQGQRFADETEAEATLSPAPPAVNRVRFTDPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCC QLPVRPAAELPVNLALRL CCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA