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The map label for this gene is motB [H]

Identifier: 116620375

GI number: 116620375

Start: 1549938

End: 1550651

Strand: Direct

Name: motB [H]

Synonym: Acid_1252

Alternate gene names: 116620375

Gene position: 1549938-1550651 (Clockwise)

Preceding gene: 116620374

Following gene: 116620377

Centisome position: 15.55

GC content: 62.89

Gene sequence:

>714_bases
GTGCAGGTCCGCTTTCGGCCGGCTCCGGGTCACCGCTCGGGGAGCGGTGCGTGGAAGGTGGCCTATGCCGATTTCGTGAC
CGCACTGATGGCGCTCTTCATTGTGTTATGGCTGATGAATTCGAGCACGAAGGTGAAGAGCTCGATCAGCGGATATTTTC
GCGACCCGCGCGGCTTCACCCGTACCCTGGGGGCGGGGCCGGCCAATTCGGGCGAAGGGCTTAGCCTGCGCACTGACGGC
TTGCTCGACATCCGGCGAAAGCTGGAAGAGGCGCTGCGCGCCATGCCCGAATTCAGCAAGCTGCGTGACAACGTGAAGTT
CAGCGTGACCGGTGAGGGCCTGCGGATCGACCTCCTGGAAAACGATCAGGGTATGTTCTTTGTGAGCGGGAGCCCGGCGC
CAACCAGGGCCGGCGAGGAATTGCTCCGTGTTCTGGCGCGGGAAATCGGAAGACTGCCGAACAGCCTGGTGATCGAAGGC
CATACCGACGCCAAGCCGTTCCGCAATGCGCGGCCGGCGGAGGGTTACAGCAATTGGGAACTGGCGGCGGACCGCGCCAA
CGCGGCGCGGCGCCTCCTGCATCTATTTGGAGTACGGCCCGAACAAGTGGTGGAAGTGCGCGGCTTCGCCGATCAGAAGC
CGTTCAACGAAAGAGATCGCTTCGACGCGCGGAATCGCCGGGTGTCGGTAGTGGTGAAGTTCGTTACAGCTTGA

Upstream 100 bases:

>100_bases
TCGATCAAGCGCGACGCCAGGATCCCGCCTCTGCCCCATGCGAGCATCCCGGAGGCGGCCGATGCCCAAGTTCAGTCTGC
CTGAAGACGGCGCGCAGCGC

Downstream 100 bases:

>100_bases
AGAGTTCCCGCAGGCGGCGAGTTTGGACGCGGCTAACGGGGATCTCGGTGTGTTTCTTATCGTCCATGCGAAGCTGGTAG
CTGGATTTGAACCAGGGTAC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MQVRFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVKSSISGYFRDPRGFTRTLGAGPANSGEGLSLRTDG
LLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEG
HTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRPEQVVEVRGFADQKPFNERDRFDARNRRVSVVVKFVTA

Sequences:

>Translated_237_residues
MQVRFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVKSSISGYFRDPRGFTRTLGAGPANSGEGLSLRTDG
LLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEG
HTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRPEQVVEVRGFADQKPFNERDRFDARNRRVSVVVKFVTA
>Mature_237_residues
MQVRFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVKSSISGYFRDPRGFTRTLGAGPANSGEGLSLRTDG
LLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEG
HTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRPEQVVEVRGFADQKPFNERDRFDARNRRVSVVVKFVTA

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=256, Percent_Identity=33.59375, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 26434; Mature: 26434

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVKSSISGYFRDPRGFT
CCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH
RTLGAGPANSGEGLSLRTDGLLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLE
HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCEEEEEEE
NDQGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEGHTDAKPFRNARPAEGYSNWE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCH
LAADRANAARRLLHLFGVRPEQVVEVRGFADQKPFNERDRFDARNRRVSVVVKFVTA
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MQVRFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVKSSISGYFRDPRGFT
CCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH
RTLGAGPANSGEGLSLRTDGLLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLE
HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCEEEEEEE
NDQGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEGHTDAKPFRNARPAEGYSNWE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCH
LAADRANAARRLLHLFGVRPEQVVEVRGFADQKPFNERDRFDARNRRVSVVVKFVTA
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]