| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620280
Identifier: 116620280
GI number: 116620280
Start: 1426080
End: 1427855
Strand: Direct
Name: 116620280
Synonym: Acid_1157
Alternate gene names: NA
Gene position: 1426080-1427855 (Clockwise)
Preceding gene: 116620277
Following gene: 116620282
Centisome position: 14.31
GC content: 62.84
Gene sequence:
>1776_bases GTGCGAAATATGCAGCTCGAAGACCTCGGAGTCATCGGAAACTGTCAGTTTTCGGCCCTGATTCACAGCAGCGGCGCGGT GGTATGGTGTTGTCTTCCACGCTTTGACTCCGAACCGGTATTTTCGACACTCCTGGATGAGAGCGATGGCGGGAGCTTTC GAATCGGAGCTTCAAACGGGGAATGCGGAACCCAGCGCTACATTCCGAGTACCAACATTCTGGAGACGACATTTCGCACC GCGACCGGCTCTTTCCGGGTGATTGATTTTGCGCCGCGGTTTCTGCAGTTCGGCCGCGCGTTCCGGCCGACGCAGCTGGT GCGGATCGTGGAGCCGATCGAAGGCACGCCGCGCATCGTGGTGACGTGCGAGCCGCGGCTGGGATGGTCGAAGGCGCGGC CGATGGCGACGCAGGGGTCGCATCATGTGCGGTACGAAGGATTCGCCAGCCAGTTGCGGTTGACTACCGACCTGCCACTT TCGTACCTGGGTGGGCAGGCATTCACGCTGACCGGGCGGCAGCACCTCATGCTGAGCTGGGGCGCGCCGGTGGAAGAGCC GCTAGCCACTTTGTGCGAGCGCTTCTGGCATGAGACGGAGCGCTACTGGAAAAACTGGGTGAAGCAATGCGACATCCCTC CGTTATTCCAGCAGGAAGTGATTCGCTCCGCGTTGACGCTGAAGTTGCACTGCTATGAAGATACGGGCGCGATCATTGCG GCGATGACGACGTCGATTCCGGAATCGCAGGGCAGCGGGCGCACCTGGGATTACCGCTACTGCTGGCTGCGCGACTCGTA CTATGTGCTGAGCGCGTTCGGGCTGCTGGGACAGTTCGAAGAGCGCGAGCAATTTGTGCAATACCTGCTCAATGTGGTGG GCGGCGCGCCCGGGCTCAATCTGGCTCCGCTCTATCGCGTGGATGGTTCGTCGAACCTGGAGGAATCGATTCTGGAGCAC TGGGCCGGCTACAACGGCGAGCAGCCGGTGCGCATCGGCAACGGCGCTTCGACCCACTTGCAGAACGATATTTACGGAGA GATGGTGCTGGCGTTGACGCCGATTTTTCTAGACGAGCGGATGAGCGCGGAACGCTCGGCCGCGGCATTGCGATTGATCG AGGGCCTGGCGCTGAAGGCGATTTCGCTGGCCGGCGTTCCGGACGCGGGCATCTGGGAGTATCGCACCGAGTGGAAGCCG CAGACCTTTTCCAGTCTGATGTGCTGGGCGGCGGCGGACCGGATGGCGGGAATCGCGCAACGCCACGAACCGGCGCGTGC GGCCGAGTTCCGCACCGCGGCTGACCGCATTCACGCCGAAGTGGTGGCGCATTCGTGGAGTACCGCGAGAGGGAGTTTCG TGGGCCACTACGGCGGCGAGGACCTGGATGCATCGCTCCTGCAGATGGTTCGCCTGCGATTTCTGCCTACGGGCGATCCA CGGCTCGGGAACACGATCGACGCGATTCACAAGGATCTGGCGCGCGGCGCATGGCTGCAGCGCTACAGCCTCAACGACGG CTTCGGCAAACCCTCGGTGGCCTTCGTGATCTGCACCTTCTGGCTGATTGAGGCGCTGGCGGCGGCGGGCCGCCGTGACG AAGCTCGTGCTGTGTTCGACCGCATCCACGGGGCGCTATCGCCGCTCGGATTGCTTTCGGAGGACTACGATACGGCGCCG CCGCGCATGTGGGGGAACTTTCCGCAGACGTACTCGCACGTGGGCTTGATCCACGCCGCCTTCGCCGCGTCACCGACGTG GAGCGAGATTTTGTGA
Upstream 100 bases:
>100_bases CCCATGCCAGTAAGGCAAGACCCGCTAAAAGGGCCAAAGTGAATGGAACCATCCGTCGCATTCTTCTACTTTCATTAAAG CATCCGGGGTCTATGCTACT
Downstream 100 bases:
>100_bases GGACCAGGCGGGGCGCCTTTCTCGCAGAGACGCAGAGGCGCAGAGGAACGCAAAGAAGATAAAATCCGTGCTCGCTGGTG AAGTAGCAGGTTAGTCGCGC
Product: glycoside hydrolase 15-like protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family; Glycosy Hydrolase Family Protein; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Trehalose-Phosphatase; Six-Hairpin Glycosidase-Like Protein; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glucoamylase-Related Protein Trehalase; Glycosyl Hydrolase Glucoamylase
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRNMQLEDLGVIGNCQFSALIHSSGAVVWCCLPRFDSEPVFSTLLDESDGGSFRIGASNGECGTQRYIPSTNILETTFRT ATGSFRVIDFAPRFLQFGRAFRPTQLVRIVEPIEGTPRIVVTCEPRLGWSKARPMATQGSHHVRYEGFASQLRLTTDLPL SYLGGQAFTLTGRQHLMLSWGAPVEEPLATLCERFWHETERYWKNWVKQCDIPPLFQQEVIRSALTLKLHCYEDTGAIIA AMTTSIPESQGSGRTWDYRYCWLRDSYYVLSAFGLLGQFEEREQFVQYLLNVVGGAPGLNLAPLYRVDGSSNLEESILEH WAGYNGEQPVRIGNGASTHLQNDIYGEMVLALTPIFLDERMSAERSAAALRLIEGLALKAISLAGVPDAGIWEYRTEWKP QTFSSLMCWAAADRMAGIAQRHEPARAAEFRTAADRIHAEVVAHSWSTARGSFVGHYGGEDLDASLLQMVRLRFLPTGDP RLGNTIDAIHKDLARGAWLQRYSLNDGFGKPSVAFVICTFWLIEALAAAGRRDEARAVFDRIHGALSPLGLLSEDYDTAP PRMWGNFPQTYSHVGLIHAAFAASPTWSEIL
Sequences:
>Translated_591_residues MRNMQLEDLGVIGNCQFSALIHSSGAVVWCCLPRFDSEPVFSTLLDESDGGSFRIGASNGECGTQRYIPSTNILETTFRT ATGSFRVIDFAPRFLQFGRAFRPTQLVRIVEPIEGTPRIVVTCEPRLGWSKARPMATQGSHHVRYEGFASQLRLTTDLPL SYLGGQAFTLTGRQHLMLSWGAPVEEPLATLCERFWHETERYWKNWVKQCDIPPLFQQEVIRSALTLKLHCYEDTGAIIA AMTTSIPESQGSGRTWDYRYCWLRDSYYVLSAFGLLGQFEEREQFVQYLLNVVGGAPGLNLAPLYRVDGSSNLEESILEH WAGYNGEQPVRIGNGASTHLQNDIYGEMVLALTPIFLDERMSAERSAAALRLIEGLALKAISLAGVPDAGIWEYRTEWKP QTFSSLMCWAAADRMAGIAQRHEPARAAEFRTAADRIHAEVVAHSWSTARGSFVGHYGGEDLDASLLQMVRLRFLPTGDP RLGNTIDAIHKDLARGAWLQRYSLNDGFGKPSVAFVICTFWLIEALAAAGRRDEARAVFDRIHGALSPLGLLSEDYDTAP PRMWGNFPQTYSHVGLIHAAFAASPTWSEIL >Mature_591_residues MRNMQLEDLGVIGNCQFSALIHSSGAVVWCCLPRFDSEPVFSTLLDESDGGSFRIGASNGECGTQRYIPSTNILETTFRT ATGSFRVIDFAPRFLQFGRAFRPTQLVRIVEPIEGTPRIVVTCEPRLGWSKARPMATQGSHHVRYEGFASQLRLTTDLPL SYLGGQAFTLTGRQHLMLSWGAPVEEPLATLCERFWHETERYWKNWVKQCDIPPLFQQEVIRSALTLKLHCYEDTGAIIA AMTTSIPESQGSGRTWDYRYCWLRDSYYVLSAFGLLGQFEEREQFVQYLLNVVGGAPGLNLAPLYRVDGSSNLEESILEH WAGYNGEQPVRIGNGASTHLQNDIYGEMVLALTPIFLDERMSAERSAAALRLIEGLALKAISLAGVPDAGIWEYRTEWKP QTFSSLMCWAAADRMAGIAQRHEPARAAEFRTAADRIHAEVVAHSWSTARGSFVGHYGGEDLDASLLQMVRLRFLPTGDP RLGNTIDAIHKDLARGAWLQRYSLNDGFGKPSVAFVICTFWLIEALAAAGRRDEARAVFDRIHGALSPLGLLSEDYDTAP PRMWGNFPQTYSHVGLIHAAFAASPTWSEIL
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65835; Mature: 65835
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMQLEDLGVIGNCQFSALIHSSGAVVWCCLPRFDSEPVFSTLLDESDGGSFRIGASNG CCCCCCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCC ECGTQRYIPSTNILETTFRTATGSFRVIDFAPRFLQFGRAFRPTQLVRIVEPIEGTPRIV CCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHCCCCCCEEE VTCEPRLGWSKARPMATQGSHHVRYEGFASQLRLTTDLPLSYLGGQAFTLTGRQHLMLSW EEECCCCCCCCCCCCCCCCCCCEEECCHHHHEEEECCCCHHHHCCEEEEEECCEEEEEEC GAPVEEPLATLCERFWHETERYWKNWVKQCDIPPLFQQEVIRSALTLKLHCYEDTGAIIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEECCCCEEE AMTTSIPESQGSGRTWDYRYCWLRDSYYVLSAFGLLGQFEEREQFVQYLLNVVGGAPGLN EEECCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LAPLYRVDGSSNLEESILEHWAGYNGEQPVRIGNGASTHLQNDIYGEMVLALTPIFLDER CCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHCHHHHHHHHHHHHHHHHHHH MSAERSAAALRLIEGLALKAISLAGVPDAGIWEYRTEWKPQTFSSLMCWAAADRMAGIAQ HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RHEPARAAEFRTAADRIHAEVVAHSWSTARGSFVGHYGGEDLDASLLQMVRLRFLPTGDP HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC RLGNTIDAIHKDLARGAWLQRYSLNDGFGKPSVAFVICTFWLIEALAAAGRRDEARAVFD CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RIHGALSPLGLLSEDYDTAPPRMWGNFPQTYSHVGLIHAAFAASPTWSEIL HHHHHHCCHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MRNMQLEDLGVIGNCQFSALIHSSGAVVWCCLPRFDSEPVFSTLLDESDGGSFRIGASNG CCCCCCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCC ECGTQRYIPSTNILETTFRTATGSFRVIDFAPRFLQFGRAFRPTQLVRIVEPIEGTPRIV CCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHCCCCCCEEE VTCEPRLGWSKARPMATQGSHHVRYEGFASQLRLTTDLPLSYLGGQAFTLTGRQHLMLSW EEECCCCCCCCCCCCCCCCCCCEEECCHHHHEEEECCCCHHHHCCEEEEEECCEEEEEEC GAPVEEPLATLCERFWHETERYWKNWVKQCDIPPLFQQEVIRSALTLKLHCYEDTGAIIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEECCCCEEE AMTTSIPESQGSGRTWDYRYCWLRDSYYVLSAFGLLGQFEEREQFVQYLLNVVGGAPGLN EEECCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LAPLYRVDGSSNLEESILEHWAGYNGEQPVRIGNGASTHLQNDIYGEMVLALTPIFLDER CCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHCHHHHHHHHHHHHHHHHHHH MSAERSAAALRLIEGLALKAISLAGVPDAGIWEYRTEWKPQTFSSLMCWAAADRMAGIAQ HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RHEPARAAEFRTAADRIHAEVVAHSWSTARGSFVGHYGGEDLDASLLQMVRLRFLPTGDP HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC RLGNTIDAIHKDLARGAWLQRYSLNDGFGKPSVAFVICTFWLIEALAAAGRRDEARAVFD CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RIHGALSPLGLLSEDYDTAPPRMWGNFPQTYSHVGLIHAAFAASPTWSEIL HHHHHHCCHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA