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The map label for this gene is perR [H]

Identifier: 116620234

GI number: 116620234

Start: 1368156

End: 1368581

Strand: Direct

Name: perR [H]

Synonym: Acid_1111

Alternate gene names: 116620234

Gene position: 1368156-1368581 (Clockwise)

Preceding gene: 116620232

Following gene: 116620235

Centisome position: 13.73

GC content: 61.74

Gene sequence:

>426_bases
ATGGACCCCGATTTGATCAAACGCTCCTTGGCGGGCGGCGGTCTCAGGCGCACTCCGCAGCGATACGCGGTCATGGCGTT
TCTGATGGAGCAGACCGGGCATCCCACGGCCGCCGAGATCTTCGAAGCCGTTAATCGCTTGGATCCACGTTCTTCCAGGG
CTACGATCTATAACAATTTGCGCGACCTCGTGCAGGCTGGTTTAGTGCGTGAAGTGGCTATGGAAGGCCGCGCGGCGCGA
TTTGACGCGAAAGGCCTGCGGCATCACCATTTCATCTGCGACCGCTGCGGCAATGTGGAGGACGTGGACTGGTATGAGGT
GCCCAGGCCTGCCCTAGGCTCGCTCGGCAAGCGGGTACTTCGCGAATGCGAACTCATTTTCCGCGGGCTCTGTACCAGGT
GCGCGCCGCGGCGCGCTTCCCGTTAG

Upstream 100 bases:

>100_bases
TTCACAGACCCTTACTTGGTCCTCCTCACAAAACCGCAGCCATTTGTCATTCCCGTCTTGATTAACCTGCATATTAGATA
TAATCTAAACAAGGCTATTC

Downstream 100 bases:

>100_bases
TATTTTTGATTCGAAGGAAAGGATAAAAACGGATGGAAAAACAATCAAATGATGCAGCGGTGGCCGGCGCCCCCAATGAC
CACGGCGCCGCGAAGTGTCC

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDPDLIKRSLAGGGLRRTPQRYAVMAFLMEQTGHPTAAEIFEAVNRLDPRSSRATIYNNLRDLVQAGLVREVAMEGRAAR
FDAKGLRHHHFICDRCGNVEDVDWYEVPRPALGSLGKRVLRECELIFRGLCTRCAPRRASR

Sequences:

>Translated_141_residues
MDPDLIKRSLAGGGLRRTPQRYAVMAFLMEQTGHPTAAEIFEAVNRLDPRSSRATIYNNLRDLVQAGLVREVAMEGRAAR
FDAKGLRHHHFICDRCGNVEDVDWYEVPRPALGSLGKRVLRECELIFRGLCTRCAPRRASR
>Mature_141_residues
MDPDLIKRSLAGGGLRRTPQRYAVMAFLMEQTGHPTAAEIFEAVNRLDPRSSRATIYNNLRDLVQAGLVREVAMEGRAAR
FDAKGLRHHHFICDRCGNVEDVDWYEVPRPALGSLGKRVLRECELIFRGLCTRCAPRRASR

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 15964; Mature: 15964

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPDLIKRSLAGGGLRRTPQRYAVMAFLMEQTGHPTAAEIFEAVNRLDPRSSRATIYNNL
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
RDLVQAGLVREVAMEGRAARFDAKGLRHHHFICDRCGNVEDVDWYEVPRPALGSLGKRVL
HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHH
RECELIFRGLCTRCAPRRASR
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDPDLIKRSLAGGGLRRTPQRYAVMAFLMEQTGHPTAAEIFEAVNRLDPRSSRATIYNNL
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
RDLVQAGLVREVAMEGRAARFDAKGLRHHHFICDRCGNVEDVDWYEVPRPALGSLGKRVL
HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHH
RECELIFRGLCTRCAPRRASR
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA