| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620232
Identifier: 116620232
GI number: 116620232
Start: 1364117
End: 1365697
Strand: Direct
Name: 116620232
Synonym: Acid_1109
Alternate gene names: NA
Gene position: 1364117-1365697 (Clockwise)
Preceding gene: 116620231
Following gene: 116620234
Centisome position: 13.69
GC content: 60.53
Gene sequence:
>1581_bases ATGCTGGTCGAGCAAACGAGCCCTACGCGCAGGCGCGGCAAATTGCCGATTTGGATTTGGGTCACGGGCGGCCTCTCCCT CAGCGCGCTGGCGGTCGTAATCATCGTATTCGCCGCGCATTGGCCGTTCACCCGGGAGGCCGTGACGGCGGCGCTGGAAT CTGCGAGCGGGCGCCAGGTGCAGATTGGCACGTTCGCAAAGACGTACTTTCCCCCTGGCTGCACTGCCGGACAGGTGCGT TTTTTGCGCCATAAGCATCCTGGTGCGGAGCCGATTATTTCGGTGGAGAAGCTCTCCATCCGGGCGACCCTGACCGGATT GTTCGGTTCGCCCACGCATCTTTCGGAAGTGCGCGTAGCGGGAATGCACATGATCGTCGCACCCAACGTCACGGGAGAGA ATCGCACCACCGTTCTCCTGAATTCCGGACCCGGCGGCAAGGGGCTGGCGATCTCCAAGATTACCGCCGATGGGGCGGTG CTGGAGTTCATCCACGAGGATCGGAAAGAGCCCCCGTACGTGATCCGGGTCGAGCGGCTGGCGGTTACCAATGTGGGCTT CGGAACTCCGATGTTTTTTCGCGCGACGGTGCGCAATTCGGAGCCGCCCGGGGTTATCCGCGCGGAAGGCAAGTTCGGAC CGTGGAACCCCTCGGATATCGGAGCTACCCCGGTCTCGGGCACGTATGCGTACGACGATATCGATTTGAGCTTCTTTGAA AGCATTTTGGGAAAGGGGCGGGCGTGGGGGCAGTTTTCGGATTCGCTTTCGCGAATCCGTACTCGCGGGGGTGTTGAGGT GTCCGGATTCCACCTGGATGGGAGTGACCATGCGGTTCAACTCGCGACCACTTTCGATGCCACGGTGAATGCGACGAATG GCGACGTGGTGCTGAACCCGGCGGTGGCCAGCTACCGGCATACGCGGATTGAGGTGCGGGGCGCGATTGCCGCACATCAA AGCGAGCCAGGCAGGACGGCGGAATTCCGGATCGCGGTGCCATCGGGCCGGGTGGAGGATCTGCTTTACCTGTTTACAAA AGGCAAACCGGGGATGAGCGGCAACGTGGCCCTGGAAGGTCTCTTCGTCTGGCCTCCAGGGGCGCGGAAATTTTTGCAGA AGATACGCATGGACCTGACCTTCGGCATCAAGGGCAGCCGGTTCACCGCTCGCAACACACAGGACAGCATTAACCGGATC AGCGAAAGCGCGCAAGGGGAAGAAAAGAAAACGGAGGACAGCGATCCGCGGATTGTGTTATCGCAGCTCCAGGGAAAGGT TCGGCTGCGCGACGGGATCGCGAAAATATCCCAGGCCAAATTTGAGGTTCCCGGGGCCGACGCCGCGCTCAGCGGTTCGT ATGGCCTGCTCAATCAACGGATTGACCTGCACGGAACCCTCGATACCCGAGGCCGCCTCTCCGATACCACGTCGGGTTTC AAGGCGCTGGTCTTGAAAGTGGTGACGCCGCTGTTTCGAAAGAGGCACTCGGCGAGAATCATACCGTTTCGAATTACCGG CGCGTATGGGAATGAGTCTCTGGGTCTCGATTGGAAGCAGGGTCTGCTGCACTCGAAGTAA
Upstream 100 bases:
>100_bases TCGCGCCCGCACTAATACTTCCGTTTCGCTGCAATTCGCGCCTGCGAAGATATCCCGAGCGCGCAAGAATGCGTGGCCAT GCAATTGCGTAGAAACTCGC
Downstream 100 bases:
>100_bases GACCGGGGCAACTCGTGCCTTCCCACATTTCTCGCTGCATGACTGTCTGGCGTCCTCACGAGAGCGTTTGACGAACCAAC TCTACAAGATCGCGGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MLVEQTSPTRRRGKLPIWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQVQIGTFAKTYFPPGCTAGQVR FLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVAGMHMIVAPNVTGENRTTVLLNSGPGGKGLAISKITADGAV LEFIHEDRKEPPYVIRVERLAVTNVGFGTPMFFRATVRNSEPPGVIRAEGKFGPWNPSDIGATPVSGTYAYDDIDLSFFE SILGKGRAWGQFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDATVNATNGDVVLNPAVASYRHTRIEVRGAIAAHQ SEPGRTAEFRIAVPSGRVEDLLYLFTKGKPGMSGNVALEGLFVWPPGARKFLQKIRMDLTFGIKGSRFTARNTQDSINRI SESAQGEEKKTEDSDPRIVLSQLQGKVRLRDGIAKISQAKFEVPGADAALSGSYGLLNQRIDLHGTLDTRGRLSDTTSGF KALVLKVVTPLFRKRHSARIIPFRITGAYGNESLGLDWKQGLLHSK
Sequences:
>Translated_526_residues MLVEQTSPTRRRGKLPIWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQVQIGTFAKTYFPPGCTAGQVR FLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVAGMHMIVAPNVTGENRTTVLLNSGPGGKGLAISKITADGAV LEFIHEDRKEPPYVIRVERLAVTNVGFGTPMFFRATVRNSEPPGVIRAEGKFGPWNPSDIGATPVSGTYAYDDIDLSFFE SILGKGRAWGQFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDATVNATNGDVVLNPAVASYRHTRIEVRGAIAAHQ SEPGRTAEFRIAVPSGRVEDLLYLFTKGKPGMSGNVALEGLFVWPPGARKFLQKIRMDLTFGIKGSRFTARNTQDSINRI SESAQGEEKKTEDSDPRIVLSQLQGKVRLRDGIAKISQAKFEVPGADAALSGSYGLLNQRIDLHGTLDTRGRLSDTTSGF KALVLKVVTPLFRKRHSARIIPFRITGAYGNESLGLDWKQGLLHSK >Mature_526_residues MLVEQTSPTRRRGKLPIWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQVQIGTFAKTYFPPGCTAGQVR FLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVAGMHMIVAPNVTGENRTTVLLNSGPGGKGLAISKITADGAV LEFIHEDRKEPPYVIRVERLAVTNVGFGTPMFFRATVRNSEPPGVIRAEGKFGPWNPSDIGATPVSGTYAYDDIDLSFFE SILGKGRAWGQFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDATVNATNGDVVLNPAVASYRHTRIEVRGAIAAHQ SEPGRTAEFRIAVPSGRVEDLLYLFTKGKPGMSGNVALEGLFVWPPGARKFLQKIRMDLTFGIKGSRFTARNTQDSINRI SESAQGEEKKTEDSDPRIVLSQLQGKVRLRDGIAKISQAKFEVPGADAALSGSYGLLNQRIDLHGTLDTRGRLSDTTSGF KALVLKVVTPLFRKRHSARIIPFRITGAYGNESLGLDWKQGLLHSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57059; Mature: 57059
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEQTSPTRRRGKLPIWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQV CCCCCCCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEE QIGTFAKTYFPPGCTAGQVRFLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVA EEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHEEEE GMHMIVAPNVTGENRTTVLLNSGPGGKGLAISKITADGAVLEFIHEDRKEPPYVIRVERL EEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEE AVTNVGFGTPMFFRATVRNSEPPGVIRAEGKFGPWNPSDIGATPVSGTYAYDDIDLSFFE EEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH SILGKGRAWGQFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDATVNATNGDVVLNP HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECEEEECCCCCEEECC AVASYRHTRIEVRGAIAAHQSEPGRTAEFRIAVPSGRVEDLLYLFTKGKPGMSGNVALEG HHHCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEE LFVWPPGARKFLQKIRMDLTFGIKGSRFTARNTQDSINRISESAQGEEKKTEDSDPRIVL EEEECCCHHHHHHHHHHCEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE SQLQGKVRLRDGIAKISQAKFEVPGADAALSGSYGLLNQRIDLHGTLDTRGRLSDTTSGF EHHCCCEEEHHHHHHHHHCEEECCCCCCEECCCCCHHCCEEEEEEECCCCCCCCCCCHHH KALVLKVVTPLFRKRHSARIIPFRITGAYGNESLGLDWKQGLLHSK HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure MLVEQTSPTRRRGKLPIWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQV CCCCCCCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEE QIGTFAKTYFPPGCTAGQVRFLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVA EEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHEEEE GMHMIVAPNVTGENRTTVLLNSGPGGKGLAISKITADGAVLEFIHEDRKEPPYVIRVERL EEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEE AVTNVGFGTPMFFRATVRNSEPPGVIRAEGKFGPWNPSDIGATPVSGTYAYDDIDLSFFE EEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH SILGKGRAWGQFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDATVNATNGDVVLNP HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECEEEECCCCCEEECC AVASYRHTRIEVRGAIAAHQSEPGRTAEFRIAVPSGRVEDLLYLFTKGKPGMSGNVALEG HHHCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEE LFVWPPGARKFLQKIRMDLTFGIKGSRFTARNTQDSINRISESAQGEEKKTEDSDPRIVL EEEECCCHHHHHHHHHHCEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE SQLQGKVRLRDGIAKISQAKFEVPGADAALSGSYGLLNQRIDLHGTLDTRGRLSDTTSGF EHHCCCEEEHHHHHHHHHCEEECCCCCCEECCCCCHHCCEEEEEEECCCCCCCCCCCHHH KALVLKVVTPLFRKRHSARIIPFRITGAYGNESLGLDWKQGLLHSK HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA