| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620190
Identifier: 116620190
GI number: 116620190
Start: 1314386
End: 1316539
Strand: Direct
Name: 116620190
Synonym: Acid_1063
Alternate gene names: NA
Gene position: 1314386-1316539 (Clockwise)
Preceding gene: 116620189
Following gene: 116620191
Centisome position: 13.19
GC content: 63.79
Gene sequence:
>2154_bases ATGGAACAGCTTATCGAGACTGGTAAGCGTACGATTAAGTACCTTTGCCTTGTCCAGATTTTTCTTTTTACCGCTTTCGC CCAAACTACGCCTTCTCCCATACACTGCCAGACTTCCTCCACACCGCTCCAGGTGCGCGCCGAAGGGCTGACGGAACGTC TGGGTGACATCCTCCTACAGTGCTCCAGCTCTAATTCCGGGACCGTATTCAACGCCAACCTAACCGTATTCCTGCCAGTG AATGTCACCAACCGGGTGGATGCGGGTAACACTACTCACGATGCCGTGGTCCTGGTGGACCTTGGCAGCGGACCGATACC GACGCCGGTCGCAGGCCAGATATCGGGGAATAATATCGCCTTCAACGGGATCTCCTACACGGTACCGGCCAGCGGCACGT TCAGTATCAGGATTTCGAACGTGCGCGCCGCCATGAACCAACTGGGCTACACGTCCGCGAATCCGGTCGCGGTTTCGGCG TCGCTTTCTTCCACGCTGGCCATCGATCAGGCACAGTTGATCGTCGGCTACTCGCAGCCGGGGATGCGGGCGAGCATGGG CAGCGCACAGATTTCCTGTTACGGATCGCCCACTCCGGACACGTTCGACATGCCGAGCCTGTTCGCCGCGGGTACGGCGC TGGCTTCCACGCGGATTACGGAAGGCTTCGCAAGCGCGTTCGAAGCGCGCACCACGGGGCTGGACAACGGGACCCGATTC CTGGTGAAGTACAGCGGCTTTCCTTCGACCACGCACCTCTACATTCCGGATGTGGTGGCCGGCTCGGGCGCGCTGCAACC GACCTCCGGCGGCGATTTGAACCTGCCGCAGATGGTAGGACAGTATCAGCCCGGCAGCGGAGCGCTGGTGCTGGTTCGGG TGCAGGGAGCGGACGCTACCGGCGCCGGGGGCTTTGCGGTTTCGCCGCCGCAGGGTGCGGGGCCCGTCACGCTCAGCTCG GTCAGTGAAGTCACGTTGACGAATGGCTCGGGCTACGCGGTTTACGAAGTGGCCGCGGCGAATCCCGCGATGCAGGAGGC GGTGCAGTTCCCGACCTTCATTTTGCTGCCGCGCTTCACGCCGCCGACCGTGGCCGACGCAACTGTTTCGCTGGCGCCGG TCTCCAACGTGACGACGGCCTCGACCACGGCACCGGTGCCGCGCTTCGCCAACGTGAACACGATCAGCGATTGCACGCTG TATGGCGATTGCCCGGTGCCGCTGGCGCCCAAGCTGTTCCTGAACGCGTCGCCGATCAAGATGAGCGCCGTGGCCGCCGG TGGGGCGTTGACGAGTCCGGCCGGGAGCTTCAGCGTTCACAATGACGGCGGCGGCACGCTGACGTGGAACACGTCCATCA TTTATCAGCAGGGCAGCGGCTGGCTGGTCTTCGATACCCCGTCGGGTACGAACGATGCGACCGTGAAGGTCACGGTCGAT ACCAAGAGTCTCTCGGCGGGGATCTATCAGGCCACGGTGATCGTGAACGCCGGCACGGCGGGAAGCCAGAGCGTGCCAGT GACGCTGACCGTCACCGCGCCAACGCCTCCACCTCCTCCGGCGGCACCGCCGGTATCGGTAACCCAGGTGCTGAGCGCGG CCAGTTTACAGGCAGCGCCGCTGGTGCCGGGATCGCTTTCCACCCTGATGGGTACGCACTTCTCGGGAAAGAACGTGGCG GTTACGTTCGACGGAGTTGCCGCCAGCCTGCTTTACGCCAGCGATACGCAGATCAATCTCCAGGTGCCCGCAAGCCTGGG GGCGAAGACTACGGCGAGCCTGGTGGTGACGGTTGATGGCGTCAGCAGCACGGCGCAGACGGTCCCGCTAGCGGTGGCCT GGCCGGCCGTGTTTCCCCACGGCGTCTTCAATCAGGACAACTCTGAGAACACTGCCGCAGCCGCGGGGAAGGTGGGAGAC ATCCTGCAGATCTTCGCCACCGGCATTCCCAAGGTCGCCACGGTAAGCGCCCAGATCGGCGGCCGGAAGGATCTGATTCC GGTCTACGCCGGCGAGGCGCCGACGGCACCGGGTGTGCAACAGATCAATGTTGCGGTACCCGACGGCGTGACGGGACCCG CCACGGTCGTGGTGTGCGCCACCACCGGAGGGCAGCAGTATTGCTCGCCCGGTTACACGATCACGCTACGGTGA
Upstream 100 bases:
>100_bases CAGACATGGCGCACGGTCATGGAGGATGCAGCCCAAAGCGTGAGCCAAAGCGAGCCCGGAATCTTCGACGTGAACAGCGG ATCGGATAAAATGGCACTCG
Downstream 100 bases:
>100_bases GCGGCCGGCACAATCAGCCGGCACAATCCATGGAGCGCCGCGGACGTCGGACGGGTTCCTGTTACCCTATTCTCTTCATG CTCCGACTCCTGGCCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MEQLIETGKRTIKYLCLVQIFLFTAFAQTTPSPIHCQTSSTPLQVRAEGLTERLGDILLQCSSSNSGTVFNANLTVFLPV NVTNRVDAGNTTHDAVVLVDLGSGPIPTPVAGQISGNNIAFNGISYTVPASGTFSIRISNVRAAMNQLGYTSANPVAVSA SLSSTLAIDQAQLIVGYSQPGMRASMGSAQISCYGSPTPDTFDMPSLFAAGTALASTRITEGFASAFEARTTGLDNGTRF LVKYSGFPSTTHLYIPDVVAGSGALQPTSGGDLNLPQMVGQYQPGSGALVLVRVQGADATGAGGFAVSPPQGAGPVTLSS VSEVTLTNGSGYAVYEVAAANPAMQEAVQFPTFILLPRFTPPTVADATVSLAPVSNVTTASTTAPVPRFANVNTISDCTL YGDCPVPLAPKLFLNASPIKMSAVAAGGALTSPAGSFSVHNDGGGTLTWNTSIIYQQGSGWLVFDTPSGTNDATVKVTVD TKSLSAGIYQATVIVNAGTAGSQSVPVTLTVTAPTPPPPPAAPPVSVTQVLSAASLQAAPLVPGSLSTLMGTHFSGKNVA VTFDGVAASLLYASDTQINLQVPASLGAKTTASLVVTVDGVSSTAQTVPLAVAWPAVFPHGVFNQDNSENTAAAAGKVGD ILQIFATGIPKVATVSAQIGGRKDLIPVYAGEAPTAPGVQQINVAVPDGVTGPATVVVCATTGGQQYCSPGYTITLR
Sequences:
>Translated_717_residues MEQLIETGKRTIKYLCLVQIFLFTAFAQTTPSPIHCQTSSTPLQVRAEGLTERLGDILLQCSSSNSGTVFNANLTVFLPV NVTNRVDAGNTTHDAVVLVDLGSGPIPTPVAGQISGNNIAFNGISYTVPASGTFSIRISNVRAAMNQLGYTSANPVAVSA SLSSTLAIDQAQLIVGYSQPGMRASMGSAQISCYGSPTPDTFDMPSLFAAGTALASTRITEGFASAFEARTTGLDNGTRF LVKYSGFPSTTHLYIPDVVAGSGALQPTSGGDLNLPQMVGQYQPGSGALVLVRVQGADATGAGGFAVSPPQGAGPVTLSS VSEVTLTNGSGYAVYEVAAANPAMQEAVQFPTFILLPRFTPPTVADATVSLAPVSNVTTASTTAPVPRFANVNTISDCTL YGDCPVPLAPKLFLNASPIKMSAVAAGGALTSPAGSFSVHNDGGGTLTWNTSIIYQQGSGWLVFDTPSGTNDATVKVTVD TKSLSAGIYQATVIVNAGTAGSQSVPVTLTVTAPTPPPPPAAPPVSVTQVLSAASLQAAPLVPGSLSTLMGTHFSGKNVA VTFDGVAASLLYASDTQINLQVPASLGAKTTASLVVTVDGVSSTAQTVPLAVAWPAVFPHGVFNQDNSENTAAAAGKVGD ILQIFATGIPKVATVSAQIGGRKDLIPVYAGEAPTAPGVQQINVAVPDGVTGPATVVVCATTGGQQYCSPGYTITLR >Mature_717_residues MEQLIETGKRTIKYLCLVQIFLFTAFAQTTPSPIHCQTSSTPLQVRAEGLTERLGDILLQCSSSNSGTVFNANLTVFLPV NVTNRVDAGNTTHDAVVLVDLGSGPIPTPVAGQISGNNIAFNGISYTVPASGTFSIRISNVRAAMNQLGYTSANPVAVSA SLSSTLAIDQAQLIVGYSQPGMRASMGSAQISCYGSPTPDTFDMPSLFAAGTALASTRITEGFASAFEARTTGLDNGTRF LVKYSGFPSTTHLYIPDVVAGSGALQPTSGGDLNLPQMVGQYQPGSGALVLVRVQGADATGAGGFAVSPPQGAGPVTLSS VSEVTLTNGSGYAVYEVAAANPAMQEAVQFPTFILLPRFTPPTVADATVSLAPVSNVTTASTTAPVPRFANVNTISDCTL YGDCPVPLAPKLFLNASPIKMSAVAAGGALTSPAGSFSVHNDGGGTLTWNTSIIYQQGSGWLVFDTPSGTNDATVKVTVD TKSLSAGIYQATVIVNAGTAGSQSVPVTLTVTAPTPPPPPAAPPVSVTQVLSAASLQAAPLVPGSLSTLMGTHFSGKNVA VTFDGVAASLLYASDTQINLQVPASLGAKTTASLVVTVDGVSSTAQTVPLAVAWPAVFPHGVFNQDNSENTAAAAGKVGD ILQIFATGIPKVATVSAQIGGRKDLIPVYAGEAPTAPGVQQINVAVPDGVTGPATVVVCATTGGQQYCSPGYTITLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72778; Mature: 72778
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLIETGKRTIKYLCLVQIFLFTAFAQTTPSPIHCQTSSTPLQVRAEGLTERLGDILLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHEEE CSSSNSGTVFNANLTVFLPVNVTNRVDAGNTTHDAVVLVDLGSGPIPTPVAGQISGNNIA ECCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCEEE FNGISYTVPASGTFSIRISNVRAAMNQLGYTSANPVAVSASLSSTLAIDQAQLIVGYSQP ECCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCEEEEEEECCC GMRASMGSAQISCYGSPTPDTFDMPSLFAAGTALASTRITEGFASAFEARTTGLDNGTRF CCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LVKYSGFPSTTHLYIPDVVAGSGALQPTSGGDLNLPQMVGQYQPGSGALVLVRVQGADAT EEEECCCCCCEEEEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCC GAGGFAVSPPQGAGPVTLSSVSEVTLTNGSGYAVYEVAAANPAMQEAVQFPTFILLPRFT CCCCEEECCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCHHHHHHHCCCEEEEEECCC PPTVADATVSLAPVSNVTTASTTAPVPRFANVNTISDCTLYGDCPVPLAPKLFLNASPIK CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCE MSAVAAGGALTSPAGSFSVHNDGGGTLTWNTSIIYQQGSGWLVFDTPSGTNDATVKVTVD EEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEE TKSLSAGIYQATVIVNAGTAGSQSVPVTLTVTAPTPPPPPAAPPVSVTQVLSAASLQAAP CHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC LVPGSLSTLMGTHFSGKNVAVTFDGVAASLLYASDTQINLQVPASLGAKTTASLVVTVDG CCCCCHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC VSSTAQTVPLAVAWPAVFPHGVFNQDNSENTAAAAGKVGDILQIFATGIPKVATVSAQIG CCCCCHHCEEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEECCC GRKDLIPVYAGEAPTAPGVQQINVAVPDGVTGPATVVVCATTGGQQYCSPGYTITLR CCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHCCCCEEEEEC >Mature Secondary Structure MEQLIETGKRTIKYLCLVQIFLFTAFAQTTPSPIHCQTSSTPLQVRAEGLTERLGDILLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHEEE CSSSNSGTVFNANLTVFLPVNVTNRVDAGNTTHDAVVLVDLGSGPIPTPVAGQISGNNIA ECCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCEEE FNGISYTVPASGTFSIRISNVRAAMNQLGYTSANPVAVSASLSSTLAIDQAQLIVGYSQP ECCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCEEEEEEECCC GMRASMGSAQISCYGSPTPDTFDMPSLFAAGTALASTRITEGFASAFEARTTGLDNGTRF CCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LVKYSGFPSTTHLYIPDVVAGSGALQPTSGGDLNLPQMVGQYQPGSGALVLVRVQGADAT EEEECCCCCCEEEEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCC GAGGFAVSPPQGAGPVTLSSVSEVTLTNGSGYAVYEVAAANPAMQEAVQFPTFILLPRFT CCCCEEECCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCHHHHHHHCCCEEEEEECCC PPTVADATVSLAPVSNVTTASTTAPVPRFANVNTISDCTLYGDCPVPLAPKLFLNASPIK CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCE MSAVAAGGALTSPAGSFSVHNDGGGTLTWNTSIIYQQGSGWLVFDTPSGTNDATVKVTVD EEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEE TKSLSAGIYQATVIVNAGTAGSQSVPVTLTVTAPTPPPPPAAPPVSVTQVLSAASLQAAP CHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC LVPGSLSTLMGTHFSGKNVAVTFDGVAASLLYASDTQINLQVPASLGAKTTASLVVTVDG CCCCCHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC VSSTAQTVPLAVAWPAVFPHGVFNQDNSENTAAAAGKVGDILQIFATGIPKVATVSAQIG CCCCCHHCEEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEECCC GRKDLIPVYAGEAPTAPGVQQINVAVPDGVTGPATVVVCATTGGQQYCSPGYTITLR CCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA