| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620176
Identifier: 116620176
GI number: 116620176
Start: 1299907
End: 1300491
Strand: Reverse
Name: 116620176
Synonym: Acid_1049
Alternate gene names: NA
Gene position: 1300491-1299907 (Counterclockwise)
Preceding gene: 116620177
Following gene: 116620175
Centisome position: 13.05
GC content: 62.05
Gene sequence:
>585_bases ATGAGTGCTCTTTCCCCTGTGCTGATCGCGCTCATGAAAGGCATCACCACGCGCGAAGAAGAGCCCGAAATCTGGCAGGC TCTCCTCGATCTGCAGGCCCGGGCGCGCGAGTACGTCGCGGTGCTCGGCCTCGAATTGATGTTGGATGAAGTAGAAGGCT ACGCCTACCTGCGCCAGCGCGTCGCGGCCGAAGGCGAGCCGGAACTGCCCCGACTCGTGGCGCGCCGCCAGCTCAGCTAT CCTGTGAGCCTCATGCTCGCGCTCCTGCGCAAGAAGCTCGCCGAGTTCGACGCAGGCAGCGGCGAGGCGCGCCTGATCTT GAGCGCGGAGCAGATCTCCGACATGATGCGTCTCTTCCTGGCCGAGACCGGCAACGAAGCCCGCCTGATGGATCGCATCG ATACCGATATCCGCAAGATTGTCGAAATGGGCTTCCTCCGCAAACTCCGCGGCAACGACGATCGCTACGAAGTCCGGCGC ATTCTAAAATCGTACGTGGACGCGCAGTGGTTGGCGCAGTTCGAACAGCGCCTCTCCGAGTACAAACAGCACATTACAGG CGAGGTGCGCGATGAGGCAGTCTGA
Upstream 100 bases:
>100_bases ACAAACAGGAACTATCCTGGGAAGATGCCGCGGGCCACCGGCGCCGCGCCACCCTCCCGCTGATCGTCTTCAGCCGTCCG GCGGTTCAGGAGCACCGTGT
Downstream 100 bases:
>100_bases GAGCCTCTTCACCGCGCTCGACGCCACGAGCCTCGCGGCACAGCGCCCCGGCTTCCGACTGGTGCGTTTCGAAGTTTACA ACTGGGGAACCTTTCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSALSPVLIALMKGITTREEEPEIWQALLDLQARAREYVAVLGLELMLDEVEGYAYLRQRVAAEGEPELPRLVARRQLSY PVSLMLALLRKKLAEFDAGSGEARLILSAEQISDMMRLFLAETGNEARLMDRIDTDIRKIVEMGFLRKLRGNDDRYEVRR ILKSYVDAQWLAQFEQRLSEYKQHITGEVRDEAV
Sequences:
>Translated_194_residues MSALSPVLIALMKGITTREEEPEIWQALLDLQARAREYVAVLGLELMLDEVEGYAYLRQRVAAEGEPELPRLVARRQLSY PVSLMLALLRKKLAEFDAGSGEARLILSAEQISDMMRLFLAETGNEARLMDRIDTDIRKIVEMGFLRKLRGNDDRYEVRR ILKSYVDAQWLAQFEQRLSEYKQHITGEVRDEAV >Mature_193_residues SALSPVLIALMKGITTREEEPEIWQALLDLQARAREYVAVLGLELMLDEVEGYAYLRQRVAAEGEPELPRLVARRQLSYP VSLMLALLRKKLAEFDAGSGEARLILSAEQISDMMRLFLAETGNEARLMDRIDTDIRKIVEMGFLRKLRGNDDRYEVRRI LKSYVDAQWLAQFEQRLSEYKQHITGEVRDEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22343; Mature: 22212
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSPVLIALMKGITTREEEPEIWQALLDLQARAREYVAVLGLELMLDEVEGYAYLRQR CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAEGEPELPRLVARRQLSYPVSLMLALLRKKLAEFDAGSGEARLILSAEQISDMMRLFL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHH AETGNEARLMDRIDTDIRKIVEMGFLRKLRGNDDRYEVRRILKSYVDAQWLAQFEQRLSE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YKQHITGEVRDEAV HHHHHCCHHHHCCC >Mature Secondary Structure SALSPVLIALMKGITTREEEPEIWQALLDLQARAREYVAVLGLELMLDEVEGYAYLRQR CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAEGEPELPRLVARRQLSYPVSLMLALLRKKLAEFDAGSGEARLILSAEQISDMMRLFL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHH AETGNEARLMDRIDTDIRKIVEMGFLRKLRGNDDRYEVRRILKSYVDAQWLAQFEQRLSE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YKQHITGEVRDEAV HHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA