| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620121
Identifier: 116620121
GI number: 116620121
Start: 1236386
End: 1236865
Strand: Direct
Name: 116620121
Synonym: Acid_0994
Alternate gene names: NA
Gene position: 1236386-1236865 (Clockwise)
Preceding gene: 116620120
Following gene: 116620126
Centisome position: 12.41
GC content: 62.29
Gene sequence:
>480_bases ATGAGTAAACCAGTAGTGTTCACTCTGATTTTCCTGCTGGCGCCAGCCGCCTGGACGCAGACCGCGCCGGCGGGGTGGAA AGTGTTAAAAGATGCCAAGAGCGCCTGCCAGATCTCAGTGCCGCCGGAATGGGCGCCGTGGAACGACACCTCGGGTGCGG CGGTGTTTCAGGACACCACGACGGCCCTCGCGGTGGTCACCACGCAAACCGGACAAAACTTCCAACCGTTGACCCCGGCC ATGCAGAGGATGTCGGGGATCGTCAAGGAGAAGCTGTTCGAGAACACGGCGAAGCGCGTCTTCTATCAGGACAGAACCTC GACCCACGCGGACGAGCCGAATGCATATAGCGCCAGCGTGCCCGGCACGGGAGGCACGTGCAGCTGCCGGGTGGTTTTTC TGCCGAAGGTTGCGGCGGAGACGGTCAAGAAGATCGTGCTCAGTCTCGCGCCGGTGGCAGCGCCGGGTCCGTCAAATTGA
Upstream 100 bases:
>100_bases GTGCGTCGGCGCCGACGGCTGCATCGTTGTTGGGCGGCGGGACGGTCTAAGTCACTTACACCCGCTTGTGCCGGAATTTC CCCGGGTGTAGAATCCGGCC
Downstream 100 bases:
>100_bases ACTCGAAGAGGCGGCTCGGCGAATCTTCCGGCAGCAGATACACGCGGCTGCCGCGAATCGCCATCCCCTCACTGGTGTAA GGGACGCCGCGGCTGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSKPVVFTLIFLLAPAAWTQTAPAGWKVLKDAKSACQISVPPEWAPWNDTSGAAVFQDTTTALAVVTTQTGQNFQPLTPA MQRMSGIVKEKLFENTAKRVFYQDRTSTHADEPNAYSASVPGTGGTCSCRVVFLPKVAAETVKKIVLSLAPVAAPGPSN
Sequences:
>Translated_159_residues MSKPVVFTLIFLLAPAAWTQTAPAGWKVLKDAKSACQISVPPEWAPWNDTSGAAVFQDTTTALAVVTTQTGQNFQPLTPA MQRMSGIVKEKLFENTAKRVFYQDRTSTHADEPNAYSASVPGTGGTCSCRVVFLPKVAAETVKKIVLSLAPVAAPGPSN >Mature_158_residues SKPVVFTLIFLLAPAAWTQTAPAGWKVLKDAKSACQISVPPEWAPWNDTSGAAVFQDTTTALAVVTTQTGQNFQPLTPAM QRMSGIVKEKLFENTAKRVFYQDRTSTHADEPNAYSASVPGTGGTCSCRVVFLPKVAAETVKKIVLSLAPVAAPGPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16909; Mature: 16778
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPVVFTLIFLLAPAAWTQTAPAGWKVLKDAKSACQISVPPEWAPWNDTSGAAVFQDTT CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCC TALAVVTTQTGQNFQPLTPAMQRMSGIVKEKLFENTAKRVFYQDRTSTHADEPNAYSASV EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCC PGTGGTCSCRVVFLPKVAAETVKKIVLSLAPVAAPGPSN CCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKPVVFTLIFLLAPAAWTQTAPAGWKVLKDAKSACQISVPPEWAPWNDTSGAAVFQDTT CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCC TALAVVTTQTGQNFQPLTPAMQRMSGIVKEKLFENTAKRVFYQDRTSTHADEPNAYSASV EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCC PGTGGTCSCRVVFLPKVAAETVKKIVLSLAPVAAPGPSN CCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA