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The map label for this gene is lemA [H]

Identifier: 116620098

GI number: 116620098

Start: 1207350

End: 1207916

Strand: Reverse

Name: lemA [H]

Synonym: Acid_0971

Alternate gene names: 116620098

Gene position: 1207916-1207350 (Counterclockwise)

Preceding gene: 116620099

Following gene: 116620096

Centisome position: 12.12

GC content: 61.38

Gene sequence:

>567_bases
ATGAAAACCGGACTCATCATTCTCGCTGTGGTGCTGCTTGTCGGGATGGGCGCCTGCAGCAAATTCGTCGGCGTTCGCAA
CGAACTGGTGACGCAGCGCGAGGCAGTCAACAGCGCCTGGAGCAGCGTGGACGTCGCCCTTCAACGCCGCGCGGACCTGA
TTCCCAACCTGGTTTCCACCGTGAAAGGCTTCGCCGCGCACGAAACCGAGGTCTTCAAGAACATCGCCGACGCGCGCGCC
GCATTGGGCGGCGCCCGTACTCCCTCGGAAAAGATCGCCGCCAACGATCAACTCTCCGGCGCCCTCTCCCGTCTTCTGGT
GATCGCCGAAAATTACCCCCAGCTACGTTCCAACGAGAATTTCCTGCGCCTGCAGGACGAGCTGGCCGGCACCGAAAACC
GCATCGCCGTGGAGCGCCGCAAATACAACGAAACCCTGCAGCGCTACAACACGACCATCGAGCTCTTCCCAAACAATATC
GTCGCCGGGCTCAGCGGCTTTACTCGCAACGACGCCTACTTCAAAACCGAGCCCGGCGCCCGAACCGTACCCAAGGTGCA
GTTCTAG

Upstream 100 bases:

>100_bases
CCCCGCGACTTCGAACCGGTGGACACCCTGTCCGCCTGCCTCAAGGGAATTGCGCAGGTAATTGACGCAGTAGACCAACT
CGCAAAATAGGAGAACATCC

Downstream 100 bases:

>100_bases
GCCACTCTAGACGAGTTCCAAGCGGATTTCGCGGCCGACCACGGCGGCAGCCTTTTGAAGAGTGCTGAGCGTGACGGAAT
CGTTTTGAGGATCTAGCAGC

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKTGLIILAVVLLVGMGACSKFVGVRNELVTQREAVNSAWSSVDVALQRRADLIPNLVSTVKGFAAHETEVFKNIADARA
ALGGARTPSEKIAANDQLSGALSRLLVIAENYPQLRSNENFLRLQDELAGTENRIAVERRKYNETLQRYNTTIELFPNNI
VAGLSGFTRNDAYFKTEPGARTVPKVQF

Sequences:

>Translated_188_residues
MKTGLIILAVVLLVGMGACSKFVGVRNELVTQREAVNSAWSSVDVALQRRADLIPNLVSTVKGFAAHETEVFKNIADARA
ALGGARTPSEKIAANDQLSGALSRLLVIAENYPQLRSNENFLRLQDELAGTENRIAVERRKYNETLQRYNTTIELFPNNI
VAGLSGFTRNDAYFKTEPGARTVPKVQF
>Mature_188_residues
MKTGLIILAVVLLVGMGACSKFVGVRNELVTQREAVNSAWSSVDVALQRRADLIPNLVSTVKGFAAHETEVFKNIADARA
ALGGARTPSEKIAANDQLSGALSRLLVIAENYPQLRSNENFLRLQDELAGTENRIAVERRKYNETLQRYNTTIELFPNNI
VAGLSGFTRNDAYFKTEPGARTVPKVQF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20651; Mature: 20651

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGLIILAVVLLVGMGACSKFVGVRNELVTQREAVNSAWSSVDVALQRRADLIPNLVST
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGFAAHETEVFKNIADARAALGGARTPSEKIAANDQLSGALSRLLVIAENYPQLRSNEN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
FLRLQDELAGTENRIAVERRKYNETLQRYNTTIELFPNNIVAGLSGFTRNDAYFKTEPGA
CEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCCEEEECCCC
RTVPKVQF
CCCCCCCC
>Mature Secondary Structure
MKTGLIILAVVLLVGMGACSKFVGVRNELVTQREAVNSAWSSVDVALQRRADLIPNLVST
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGFAAHETEVFKNIADARAALGGARTPSEKIAANDQLSGALSRLLVIAENYPQLRSNEN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
FLRLQDELAGTENRIAVERRKYNETLQRYNTTIELFPNNIVAGLSGFTRNDAYFKTEPGA
CEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCCEEEECCCC
RTVPKVQF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]