| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620074
Identifier: 116620074
GI number: 116620074
Start: 1184083
End: 1185210
Strand: Direct
Name: 116620074
Synonym: Acid_0946
Alternate gene names: NA
Gene position: 1184083-1185210 (Clockwise)
Preceding gene: 116620073
Following gene: 116620075
Centisome position: 11.88
GC content: 65.34
Gene sequence:
>1128_bases TTGGAACAGCCGGACGATAGTCACCTGACCCCGGATGAAATCTCGGTGCTGATCGATCCAGCGGGTTCGCCAGGCATCCC GGCGGAGCGGGCTGCCCATGCGCAATCGTGTGACAGGTGCAAACGGAACGTTGCCATGCAACAGGAATGGGATACGCGCC TTCATCGTCTTGCTGGAGGTCGGAGGCGAGCGCCGTCAGCGGATTGTCCGCCGGCTTCGGACTTCGCATCGCTGGCGGCC GGCCTCACCGCCGCGCCGCGCAGCGAGGAACTTCTGGCACATGCCGCACAGTGCGATGCATGCGGCGCGATCTTACATGC AGCCGTCGAGGATTTCTCCATGCCGCCCGCCGATGTCGAACTGCAAGCGTTCGCGGAATTACCCAGCTCCTCCGATGCCT GGCAGCTCCAGATGGCCCGTAAAATGGTTCGCGCATCGGGGCGCGGCGGCGTCGTCTCGATGCCGCGCAGGTCGTGGCTT GCCTGGGCGGCCGGAGTGGCTGTCGCGATCGGGGCCAGTTGGATGGCATGGCAGCAGTGGGGCGCGAGCGATCCGGCCCG CCTGATCGCTGAAGCCTATTCGCAGCAGCGGCCCTTCGAATTTCGCATTCCCGAAGCGGGCTATTCGGATCTGCGCGTGG AACGCGGCGCCGGCGGCTCGTCCTTCCAGCGGCCTCCGGCGCTCTTGGAAGCCGAGGCCAAAGTCGCTCGCGAGTTGGCC AGGGAGCCGGACAGTGTCAAGTGGCTGTCGTTGCGGGCTCGCGCCGAAATGCTGACCTGGGATCCCGGAACCGCGATCCT CACCCTGCAGCGCGCGCTGGATCGGAAGCCCGGCGACCCCGATCTCACCGCTGATCTCGGCATGGCCTATGCCCTTCGGG CGGACGCCGACAAGCGCGATCTCGACTACGCCTATGCCATCGATTACCTCGGCCGCTCGCTGAAGGTCAGGCCGGATTCC CGCGTGACGGTCTTCAATCGCGCCATCGTGTATGAGCGCATGCACCTGAATGACGAGGCCGCGCAAGATTGGCGGCATTA CCTCGAACTGGATCCGTTCGGCCCCTGGCGCGACGAAGCCCGGCGCCGCCTCAACCAGTTGGACGCAAAAAAAAACTCCG GCAGATAG
Upstream 100 bases:
>100_bases CGCCTGACCACTCTCGTCCGGCAGCAGTTGGCGGAAACGCCAGTGGTAAAGGCGGAAGGAAAATCTTCGCCGAATTCGTT ATAGCAAGGAGGAAGCGGTT
Downstream 100 bases:
>100_bases CCGTAGATCGGATTTCCGATAACCCAGGGCTGCTGTTGCAACGAATCGAGCACGGTGAAGACGTGGAACCCGAGAACTAT CTGGAACTGGCGGTCACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MEQPDDSHLTPDEISVLIDPAGSPGIPAERAAHAQSCDRCKRNVAMQQEWDTRLHRLAGGRRRAPSADCPPASDFASLAA GLTAAPRSEELLAHAAQCDACGAILHAAVEDFSMPPADVELQAFAELPSSSDAWQLQMARKMVRASGRGGVVSMPRRSWL AWAAGVAVAIGASWMAWQQWGASDPARLIAEAYSQQRPFEFRIPEAGYSDLRVERGAGGSSFQRPPALLEAEAKVARELA REPDSVKWLSLRARAEMLTWDPGTAILTLQRALDRKPGDPDLTADLGMAYALRADADKRDLDYAYAIDYLGRSLKVRPDS RVTVFNRAIVYERMHLNDEAAQDWRHYLELDPFGPWRDEARRRLNQLDAKKNSGR
Sequences:
>Translated_375_residues MEQPDDSHLTPDEISVLIDPAGSPGIPAERAAHAQSCDRCKRNVAMQQEWDTRLHRLAGGRRRAPSADCPPASDFASLAA GLTAAPRSEELLAHAAQCDACGAILHAAVEDFSMPPADVELQAFAELPSSSDAWQLQMARKMVRASGRGGVVSMPRRSWL AWAAGVAVAIGASWMAWQQWGASDPARLIAEAYSQQRPFEFRIPEAGYSDLRVERGAGGSSFQRPPALLEAEAKVARELA REPDSVKWLSLRARAEMLTWDPGTAILTLQRALDRKPGDPDLTADLGMAYALRADADKRDLDYAYAIDYLGRSLKVRPDS RVTVFNRAIVYERMHLNDEAAQDWRHYLELDPFGPWRDEARRRLNQLDAKKNSGR >Mature_375_residues MEQPDDSHLTPDEISVLIDPAGSPGIPAERAAHAQSCDRCKRNVAMQQEWDTRLHRLAGGRRRAPSADCPPASDFASLAA GLTAAPRSEELLAHAAQCDACGAILHAAVEDFSMPPADVELQAFAELPSSSDAWQLQMARKMVRASGRGGVVSMPRRSWL AWAAGVAVAIGASWMAWQQWGASDPARLIAEAYSQQRPFEFRIPEAGYSDLRVERGAGGSSFQRPPALLEAEAKVARELA REPDSVKWLSLRARAEMLTWDPGTAILTLQRALDRKPGDPDLTADLGMAYALRADADKRDLDYAYAIDYLGRSLKVRPDS RVTVFNRAIVYERMHLNDEAAQDWRHYLELDPFGPWRDEARRRLNQLDAKKNSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41452; Mature: 41452
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQPDDSHLTPDEISVLIDPAGSPGIPAERAAHAQSCDRCKRNVAMQQEWDTRLHRLAGG CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC RRRAPSADCPPASDFASLAAGLTAAPRSEELLAHAAQCDACGAILHAAVEDFSMPPADVE CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LQAFAELPSSSDAWQLQMARKMVRASGRGGVVSMPRRSWLAWAAGVAVAIGASWMAWQQW HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHC GASDPARLIAEAYSQQRPFEFRIPEAGYSDLRVERGAGGSSFQRPPALLEAEAKVARELA CCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH REPDSVKWLSLRARAEMLTWDPGTAILTLQRALDRKPGDPDLTADLGMAYALRADADKRD CCCCCEEEHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCHH LDYAYAIDYLGRSLKVRPDSRVTVFNRAIVYERMHLNDEAAQDWRHYLELDPFGPWRDEA CHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH RRRLNQLDAKKNSGR HHHHHHHHCCCCCCC >Mature Secondary Structure MEQPDDSHLTPDEISVLIDPAGSPGIPAERAAHAQSCDRCKRNVAMQQEWDTRLHRLAGG CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC RRRAPSADCPPASDFASLAAGLTAAPRSEELLAHAAQCDACGAILHAAVEDFSMPPADVE CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LQAFAELPSSSDAWQLQMARKMVRASGRGGVVSMPRRSWLAWAAGVAVAIGASWMAWQQW HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHC GASDPARLIAEAYSQQRPFEFRIPEAGYSDLRVERGAGGSSFQRPPALLEAEAKVARELA CCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH REPDSVKWLSLRARAEMLTWDPGTAILTLQRALDRKPGDPDLTADLGMAYALRADADKRD CCCCCEEEHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCHH LDYAYAIDYLGRSLKVRPDSRVTVFNRAIVYERMHLNDEAAQDWRHYLELDPFGPWRDEA CHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH RRRLNQLDAKKNSGR HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA