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The map label for this gene is 116620073

Identifier: 116620073

GI number: 116620073

Start: 1183401

End: 1184066

Strand: Direct

Name: 116620073

Synonym: Acid_0945

Alternate gene names: NA

Gene position: 1183401-1184066 (Clockwise)

Preceding gene: 116620072

Following gene: 116620074

Centisome position: 11.87

GC content: 61.41

Gene sequence:

>666_bases
GTGATAAGGGACGACCTGACTTCCGAGGAACTGGTTCGCGCCTGCATCGAGAGGGGCGATGAGGCGGCTTGGAGGGAATT
CGTCCGTCGCTTCCGTCCGGTGATTACCGCGGTCGTTAGCCGGACCGCTCGTCGCTTCGGCCAGGCGAGCCCGCAGTTGA
TCGACGACCTGGTCCAGGAAACCTACCTGAAGCTTTGCGCCAATCGTTGCCGCATCTTGCGCGAATTTACGCCGCGGGCC
GAGGAGTCGATCTTTGGCCTGCTCAAGACCATCGCATTCAGCGTCGCGCATGACTATTTTCGCGGCGCCTTGGCCGCCAT
GCGAGGCGCCGGCAGGAAGGAGTCGAGCCTCGATACTTACCTGGAGAGCACTATCCCGGGCCGCGACGCGCTGCCCGAAG
TCGAGCGGAATATCCTTCTCAAGCAGATCGATAGCCTCCTCTCATTCCAGCCCGATCCGGGAATTCCCGAGCGCGACCGG
CAGATCTTCTGGCTGTATTACCGCCACGGCATGACCGCGCGCGCGATCGCGGCGATTCCACACGTAGGGTTGACTCCGAA
GGGCGTCGAAAGCGTAATCCAGCGCCTGACCACTCTCGTCCGGCAGCAGTTGGCGGAAACGCCAGTGGTAAAGGCGGAAG
GAAAATCTTCGCCGAATTCGTTATAG

Upstream 100 bases:

>100_bases
CAACCGTCGCGACGTACCGGACGCGATCGGTGTGCCTGCTATCCGTACAGCGGCCTTTCAACGGGGCTTCATCTCGCATG
TGATACAATCCACCACACTT

Downstream 100 bases:

>100_bases
CAAGGAGGAAGCGGTTTTGGAACAGCCGGACGATAGTCACCTGACCCCGGATGAAATCTCGGTGCTGATCGATCCAGCGG
GTTCGCCAGGCATCCCGGCG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIRDDLTSEELVRACIERGDEAAWREFVRRFRPVITAVVSRTARRFGQASPQLIDDLVQETYLKLCANRCRILREFTPRA
EESIFGLLKTIAFSVAHDYFRGALAAMRGAGRKESSLDTYLESTIPGRDALPEVERNILLKQIDSLLSFQPDPGIPERDR
QIFWLYYRHGMTARAIAAIPHVGLTPKGVESVIQRLTTLVRQQLAETPVVKAEGKSSPNSL

Sequences:

>Translated_221_residues
MIRDDLTSEELVRACIERGDEAAWREFVRRFRPVITAVVSRTARRFGQASPQLIDDLVQETYLKLCANRCRILREFTPRA
EESIFGLLKTIAFSVAHDYFRGALAAMRGAGRKESSLDTYLESTIPGRDALPEVERNILLKQIDSLLSFQPDPGIPERDR
QIFWLYYRHGMTARAIAAIPHVGLTPKGVESVIQRLTTLVRQQLAETPVVKAEGKSSPNSL
>Mature_221_residues
MIRDDLTSEELVRACIERGDEAAWREFVRRFRPVITAVVSRTARRFGQASPQLIDDLVQETYLKLCANRCRILREFTPRA
EESIFGLLKTIAFSVAHDYFRGALAAMRGAGRKESSLDTYLESTIPGRDALPEVERNILLKQIDSLLSFQPDPGIPERDR
QIFWLYYRHGMTARAIAAIPHVGLTPKGVESVIQRLTTLVRQQLAETPVVKAEGKSSPNSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24968; Mature: 24968

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDDLTSEELVRACIERGDEAAWREFVRRFRPVITAVVSRTARRFGQASPQLIDDLVQE
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TYLKLCANRCRILREFTPRAEESIFGLLKTIAFSVAHDYFRGALAAMRGAGRKESSLDTY
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LESTIPGRDALPEVERNILLKQIDSLLSFQPDPGIPERDRQIFWLYYRHGMTARAIAAIP
HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCHHHHHHHCC
HVGLTPKGVESVIQRLTTLVRQQLAETPVVKAEGKSSPNSL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MIRDDLTSEELVRACIERGDEAAWREFVRRFRPVITAVVSRTARRFGQASPQLIDDLVQE
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TYLKLCANRCRILREFTPRAEESIFGLLKTIAFSVAHDYFRGALAAMRGAGRKESSLDTY
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LESTIPGRDALPEVERNILLKQIDSLLSFQPDPGIPERDRQIFWLYYRHGMTARAIAAIP
HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCHHHHHHHCC
HVGLTPKGVESVIQRLTTLVRQQLAETPVVKAEGKSSPNSL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA