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The map label for this gene is yecD [C]

Identifier: 116620038

GI number: 116620038

Start: 1137722

End: 1138279

Strand: Reverse

Name: yecD [C]

Synonym: Acid_0910

Alternate gene names: 116620038

Gene position: 1138279-1137722 (Counterclockwise)

Preceding gene: 116620039

Following gene: 116620036

Centisome position: 11.42

GC content: 63.8

Gene sequence:

>558_bases
ATGACGCTGAACGGCGCCGCGCTGCTCGTGATCGACGTACAGAAGGCCATCGATCACCCGAGCTGGGGCGTACGCAACAA
TCCTCAGGCCGAGTCCAATATCGCCGCGCTGCTGGCCGCGTGGCGCACATCCGGCCAGCCCGTCTTCCATATCCGCCACG
ATTCCGCCGAGCCCCAATCGACCTACCGGCCGGGGCAGCCGGGGCATGATTTCAAGCCGGAAGCCCTCCCGTTGGAAGAC
GAACCGGTAATCGCAAAGCGCACCAACAGCGCATTCATCGGAACCGATCTTGAGGCGCGATTGCGTACCGCGGGCATCGC
AACCGTGGTAATCACAGGCGTGATCACGAACAATTCGGTGGAGGCCACCGTCCGAATGGCCGGCAATCTGGGCTTCACGA
CTTTTCTGGTGGAAGACGCCGCCTTCACCTTCGGCCGCAAGGACTGGAACGGCGGGTGGCGATCGGCGAGCGAGGTTCAC
GCGATGAGCCTGGCCAACCTGGACGGCGAGTATTGCACGGTCACCCGGACCGCGGACATGCTGGCCCACCTGACCTGA

Upstream 100 bases:

>100_bases
ACGCGCAGGCGCACACCGCCGACGTGACCCTCACATTCGGAGCCGAGGATCCCACGAAGAAACCGGGGAGGCGCGGACGC
GGCGGGCGGGGCGGAGATCA

Downstream 100 bases:

>100_bases
GAACGATTCAGTTTTCCAGCTTCCACAAAATCTGGCGCAGCATTCCCAGGATTACCTTGGCATCGCGTCCGGGAATTTCC
AGGCGGCGCACCAGGCGGCG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTLNGAALLVIDVQKAIDHPSWGVRNNPQAESNIAALLAAWRTSGQPVFHIRHDSAEPQSTYRPGQPGHDFKPEALPLED
EPVIAKRTNSAFIGTDLEARLRTAGIATVVITGVITNNSVEATVRMAGNLGFTTFLVEDAAFTFGRKDWNGGWRSASEVH
AMSLANLDGEYCTVTRTADMLAHLT

Sequences:

>Translated_185_residues
MTLNGAALLVIDVQKAIDHPSWGVRNNPQAESNIAALLAAWRTSGQPVFHIRHDSAEPQSTYRPGQPGHDFKPEALPLED
EPVIAKRTNSAFIGTDLEARLRTAGIATVVITGVITNNSVEATVRMAGNLGFTTFLVEDAAFTFGRKDWNGGWRSASEVH
AMSLANLDGEYCTVTRTADMLAHLT
>Mature_184_residues
TLNGAALLVIDVQKAIDHPSWGVRNNPQAESNIAALLAAWRTSGQPVFHIRHDSAEPQSTYRPGQPGHDFKPEALPLEDE
PVIAKRTNSAFIGTDLEARLRTAGIATVVITGVITNNSVEATVRMAGNLGFTTFLVEDAAFTFGRKDWNGGWRSASEVHA
MSLANLDGEYCTVTRTADMLAHLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=147, Percent_Identity=39.4557823129252, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19998; Mature: 19866

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNGAALLVIDVQKAIDHPSWGVRNNPQAESNIAALLAAWRTSGQPVFHIRHDSAEPQS
CCCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
TYRPGQPGHDFKPEALPLEDEPVIAKRTNSAFIGTDLEARLRTAGIATVVITGVITNNSV
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHCCEEEEEEEEEEECCCE
EATVRMAGNLGFTTFLVEDAAFTFGRKDWNGGWRSASEVHAMSLANLDGEYCTVTRTADM
EEEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHH
LAHLT
HHHCC
>Mature Secondary Structure 
TLNGAALLVIDVQKAIDHPSWGVRNNPQAESNIAALLAAWRTSGQPVFHIRHDSAEPQS
CCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
TYRPGQPGHDFKPEALPLEDEPVIAKRTNSAFIGTDLEARLRTAGIATVVITGVITNNSV
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHCCEEEEEEEEEEECCCE
EATVRMAGNLGFTTFLVEDAAFTFGRKDWNGGWRSASEVHAMSLANLDGEYCTVTRTADM
EEEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHH
LAHLT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA