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The map label for this gene is 116620024

Identifier: 116620024

GI number: 116620024

Start: 1127321

End: 1127743

Strand: Reverse

Name: 116620024

Synonym: Acid_0896

Alternate gene names: NA

Gene position: 1127743-1127321 (Counterclockwise)

Preceding gene: 116620025

Following gene: 116620018

Centisome position: 11.32

GC content: 57.45

Gene sequence:

>423_bases
ATGATTTCGCTCCGCCTCGTAATCGACACCAACATCGTCATTTCGGCAGCACTGAAGCCGGACGATCTGCAGCGCACGGT
CCTGTTGCTTGCGGTCACCAAACCAGCGCGACTTTACGTTTCTGAGGAGATTCTCGCGGAGTATCGGGAGGTACTCATGC
GGCCCGAGTTTCGGATCCGCAAAGGACTGCGGCAGCAACTTCTGGAACTAATCAGCCGGCACTCGCACGCAATCTCGCCA
TCCCGCCGCCTTCAAGTGACGAGCGATCCCGATGACAACAAGTTCCTGGAATGCGCCGATGCTGCACGTTGCGACTATCT
CGTGACCGGCAATCTTCGCCACTTCCCGGTCTTCTGGAAGATGACGAAGGTGATCTCGTCACGCGACTTCGTTAGCCTCG
TGGCGCCGCACCTCATTTCCTGA

Upstream 100 bases:

>100_bases
TGATCGGCGAAGAATCGCAGCGCAAGGGCACGCATAAAATGACTGCTCGCGAAATCGATCGGGTCATCAAAGCATCGCGC
ATGGAAAAAGCCAAGCGAGG

Downstream 100 bases:

>100_bases
GTCGCCTATCTACTCTTCGATCGCCAGTTCGACCCAGCCCGGCAGTGTCGCGGGACGATTGTCCAAAAATACAATCCGCC
GCGTCTTCGGGAACGGGAGA

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MISLRLVIDTNIVISAALKPDDLQRTVLLLAVTKPARLYVSEEILAEYREVLMRPEFRIRKGLRQQLLELISRHSHAISP
SRRLQVTSDPDDNKFLECADAARCDYLVTGNLRHFPVFWKMTKVISSRDFVSLVAPHLIS

Sequences:

>Translated_140_residues
MISLRLVIDTNIVISAALKPDDLQRTVLLLAVTKPARLYVSEEILAEYREVLMRPEFRIRKGLRQQLLELISRHSHAISP
SRRLQVTSDPDDNKFLECADAARCDYLVTGNLRHFPVFWKMTKVISSRDFVSLVAPHLIS
>Mature_140_residues
MISLRLVIDTNIVISAALKPDDLQRTVLLLAVTKPARLYVSEEILAEYREVLMRPEFRIRKGLRQQLLELISRHSHAISP
SRRLQVTSDPDDNKFLECADAARCDYLVTGNLRHFPVFWKMTKVISSRDFVSLVAPHLIS

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16069; Mature: 16069

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLRLVIDTNIVISAALKPDDLQRTVLLLAVTKPARLYVSEEILAEYREVLMRPEFRIR
CEEEEEEEECCEEEEECCCCCHHHHEEEEEEECCCHHEEECHHHHHHHHHHHCCCCHHHH
KGLRQQLLELISRHSHAISPSRRLQVTSDPDDNKFLECADAARCDYLVTGNLRHFPVFWK
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEECCCCCCCCEEEECCCEECHHHHH
MTKVISSRDFVSLVAPHLIS
HHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MISLRLVIDTNIVISAALKPDDLQRTVLLLAVTKPARLYVSEEILAEYREVLMRPEFRIR
CEEEEEEEECCEEEEECCCCCHHHHEEEEEEECCCHHEEECHHHHHHHHHHHCCCCHHHH
KGLRQQLLELISRHSHAISPSRRLQVTSDPDDNKFLECADAARCDYLVTGNLRHFPVFWK
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEECCCCCCCCEEEECCCEECHHHHH
MTKVISSRDFVSLVAPHLIS
HHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA