| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619953
Identifier: 116619953
GI number: 116619953
Start: 1023454
End: 1024836
Strand: Direct
Name: 116619953
Synonym: Acid_0825
Alternate gene names: NA
Gene position: 1023454-1024836 (Clockwise)
Preceding gene: 116619952
Following gene: 116619954
Centisome position: 10.27
GC content: 62.91
Gene sequence:
>1383_bases TTGAAGATTACCCGCAAGCTATTGCTCGCTTCAGTTGCGGCATTGCTGTTCGCCGCACCGCTTCCGGCGCAGGATGCAAC CGAATTGCTCACTCGCATGAAGGCGATGGAAGATCGCATCAAATCGTTGGAAGCCGAAGTCCAGACACTGAAATCGCAGC AGACCGCGGCGAGTGCGCCGCAACCGGTGCCCCAGGCGCCCACGGCGGCGCTCCCGGCGCCGATGCCCGTAGCCGCCGCG CCGCAGGACACCACTCAGTTCGGCGGCGCTGCGGGTGCCGCGGCGAAGGCACTTAACCCCGATATCAGCGTGATCGGCGA CTTCCTGGGCGCTATAGGCAATCCCGGGGGCCGGCCCACACCTTCGCTCGAAATGCACGAGACGGAAGTCGGCTTCCAGG AAGTCATCGATCCCTATGCCCGCGCGGACTTCTTCATCACGTTCGGCGAGCACGGCGTGGACCTCGAGGAGGGCTACATC ACCTTTACGTCTCTCCCTGCCGGCCTGCAGCTAAAGGTCGGCAAGATGCGCGCCGCCTTCGGCAAAGTCAACACCATGCA TAATCACGTGCTGCCGTGGACCGATCGTCCCCTGGTCACGCAGAACCTGGTGGGCGGTGAGGATGGCATCGACGACGCCG GGATTTCGCTCAGCCGCATCCTGCCCGCTCCCAAGGGCCTCTTCCTCGAAGGCACCGCGCAGATCTACCGCGGGGATAGC GACAATGTATTCGTCGCGCGCAGGCGCAGCGATGTTTCCGCGGTCGGCCACTTGCGCGCCTACGCCGATATTTCGGAAAA CTCCAATATCGACCTCGGCGGTTCCTACGCGCGCGGCCACAGCCCCTTCGCCTACGGACTCAATCAACTCTTCGGCGTGG ACGCCACCGTACGCTGGAAGCCCTTGCGGCGCGCCATCTATCACTCCTTCGTAGGACGCAGTGAATTCATCTGGACGCGG ACCAGTGTGGCGCCGACGGTGCTCGGCGATACTGTTTTCCCGGGGATCATTCTTCCGCAGCCCATCGCCCTCGGCCCGGC CACTTTAGCCAAACCGTTCGGCTTCTATGTCTCGGGCGATTACCAACTCGATCGCCGCTGGGTGGTGGGGGGACGCTTCG ACCGTTCGCAACGCGGCCAATGCCTGCCGACATTACCCGATACCATTCCGAATTGCCAGGAATTCCCGCCCGGGTTCAAC TTCACCCGCGGATATCCGCTGGTGACCGATACCGGCGCGAGTGCCCTGCTGACCTATTGGGCCAGCGAATTCTCCCAAAT CCGGGCGCAACTGCGGCGCACCTCATACGCAGGCCGCGCAACCAACGAGCTTCTATTTCAATTCCAGTTCTCGATGGGCG CCCACGGAGCGCATCCCTTCTGA
Upstream 100 bases:
>100_bases CCGCCTCAATTCCTCCTGGTTTGATTGTTAGGCCGGTCCGGGCGCAAGCCTGTGCGGGCATCTCGTTCTTTGTTCCCTTC GACAATCAGGAGATTCAGAC
Downstream 100 bases:
>100_bases TATGAAGAGGTCTTGCGTAACCCAAACCGCCGGCAGTGGCGTCACCTATAGTAGGGCAGCTCATGCTGCCCGGAAAGCTC TACTCAAATGTCGAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKITRKLLLASVAALLFAAPLPAQDATELLTRMKAMEDRIKSLEAEVQTLKSQQTAASAPQPVPQAPTAALPAPMPVAAA PQDTTQFGGAAGAAAKALNPDISVIGDFLGAIGNPGGRPTPSLEMHETEVGFQEVIDPYARADFFITFGEHGVDLEEGYI TFTSLPAGLQLKVGKMRAAFGKVNTMHNHVLPWTDRPLVTQNLVGGEDGIDDAGISLSRILPAPKGLFLEGTAQIYRGDS DNVFVARRRSDVSAVGHLRAYADISENSNIDLGGSYARGHSPFAYGLNQLFGVDATVRWKPLRRAIYHSFVGRSEFIWTR TSVAPTVLGDTVFPGIILPQPIALGPATLAKPFGFYVSGDYQLDRRWVVGGRFDRSQRGQCLPTLPDTIPNCQEFPPGFN FTRGYPLVTDTGASALLTYWASEFSQIRAQLRRTSYAGRATNELLFQFQFSMGAHGAHPF
Sequences:
>Translated_460_residues MKITRKLLLASVAALLFAAPLPAQDATELLTRMKAMEDRIKSLEAEVQTLKSQQTAASAPQPVPQAPTAALPAPMPVAAA PQDTTQFGGAAGAAAKALNPDISVIGDFLGAIGNPGGRPTPSLEMHETEVGFQEVIDPYARADFFITFGEHGVDLEEGYI TFTSLPAGLQLKVGKMRAAFGKVNTMHNHVLPWTDRPLVTQNLVGGEDGIDDAGISLSRILPAPKGLFLEGTAQIYRGDS DNVFVARRRSDVSAVGHLRAYADISENSNIDLGGSYARGHSPFAYGLNQLFGVDATVRWKPLRRAIYHSFVGRSEFIWTR TSVAPTVLGDTVFPGIILPQPIALGPATLAKPFGFYVSGDYQLDRRWVVGGRFDRSQRGQCLPTLPDTIPNCQEFPPGFN FTRGYPLVTDTGASALLTYWASEFSQIRAQLRRTSYAGRATNELLFQFQFSMGAHGAHPF >Mature_460_residues MKITRKLLLASVAALLFAAPLPAQDATELLTRMKAMEDRIKSLEAEVQTLKSQQTAASAPQPVPQAPTAALPAPMPVAAA PQDTTQFGGAAGAAAKALNPDISVIGDFLGAIGNPGGRPTPSLEMHETEVGFQEVIDPYARADFFITFGEHGVDLEEGYI TFTSLPAGLQLKVGKMRAAFGKVNTMHNHVLPWTDRPLVTQNLVGGEDGIDDAGISLSRILPAPKGLFLEGTAQIYRGDS DNVFVARRRSDVSAVGHLRAYADISENSNIDLGGSYARGHSPFAYGLNQLFGVDATVRWKPLRRAIYHSFVGRSEFIWTR TSVAPTVLGDTVFPGIILPQPIALGPATLAKPFGFYVSGDYQLDRRWVVGGRFDRSQRGQCLPTLPDTIPNCQEFPPGFN FTRGYPLVTDTGASALLTYWASEFSQIRAQLRRTSYAGRATNELLFQFQFSMGAHGAHPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49721; Mature: 49721
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITRKLLLASVAALLFAAPLPAQDATELLTRMKAMEDRIKSLEAEVQTLKSQQTAASAP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPVPQAPTAALPAPMPVAAAPQDTTQFGGAAGAAAKALNPDISVIGDFLGAIGNPGGRPT CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCC PSLEMHETEVGFQEVIDPYARADFFITFGEHGVDLEEGYITFTSLPAGLQLKVGKMRAAF CCCCCCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEHHHHHHHH GKVNTMHNHVLPWTDRPLVTQNLVGGEDGIDDAGISLSRILPAPKGLFLEGTAQIYRGDS HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEECCEEEEECCC DNVFVARRRSDVSAVGHLRAYADISENSNIDLGGSYARGHSPFAYGLNQLFGVDATVRWK CCEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHH PLRRAIYHSFVGRSEFIWTRTSVAPTVLGDTVFPGIILPQPIALGPATLAKPFGFYVSGD HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEECC YQLDRRWVVGGRFDRSQRGQCLPTLPDTIPNCQEFPPGFNFTRGYPLVTDTGASALLTYW EEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHH ASEFSQIRAQLRRTSYAGRATNELLFQFQFSMGAHGAHPF HHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCCCCC >Mature Secondary Structure MKITRKLLLASVAALLFAAPLPAQDATELLTRMKAMEDRIKSLEAEVQTLKSQQTAASAP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPVPQAPTAALPAPMPVAAAPQDTTQFGGAAGAAAKALNPDISVIGDFLGAIGNPGGRPT CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCC PSLEMHETEVGFQEVIDPYARADFFITFGEHGVDLEEGYITFTSLPAGLQLKVGKMRAAF CCCCCCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEHHHHHHHH GKVNTMHNHVLPWTDRPLVTQNLVGGEDGIDDAGISLSRILPAPKGLFLEGTAQIYRGDS HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEECCEEEEECCC DNVFVARRRSDVSAVGHLRAYADISENSNIDLGGSYARGHSPFAYGLNQLFGVDATVRWK CCEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHH PLRRAIYHSFVGRSEFIWTRTSVAPTVLGDTVFPGIILPQPIALGPATLAKPFGFYVSGD HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEECC YQLDRRWVVGGRFDRSQRGQCLPTLPDTIPNCQEFPPGFNFTRGYPLVTDTGASALLTYW EEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHH ASEFSQIRAQLRRTSYAGRATNELLFQFQFSMGAHGAHPF HHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]