| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619907
Identifier: 116619907
GI number: 116619907
Start: 978152
End: 978499
Strand: Direct
Name: 116619907
Synonym: Acid_0779
Alternate gene names: NA
Gene position: 978152-978499 (Clockwise)
Preceding gene: 116619906
Following gene: 116619909
Centisome position: 9.82
GC content: 61.21
Gene sequence:
>348_bases GTGAGTTTCTGGCGCAAAGAGATCATCGAATTCGCGTTGGATCGCGAGACCCAGGGGGCGATCGACGAGCAACGCGCCTG GATCGTCCGCGAACCGGCCAATGCCAAGCCCTACTATCACCTGGCGCAACTCTACCGCGTCGCTTTCAAAGAGGAGGAGG CGCTCGGCCTGCTGCTTGAGTCTGTCCGCCTGGATCCGAATTTCGGCGAGGCTCACGCCTCCCTTGCAGAAATGTACGTG ATTCGCGAGGATTACAAAGCGGCGTGGCGCCACGCGCGCGCCGCCGGTGACAATCACGTCCCACACGCCATCGAGATGCT CACACGCCACAAGGTACCGTCCGATTAG
Upstream 100 bases:
>100_bases ATTCGTACCACTACTTCGAGGCGCTCGGCGACCTTGTGATCACAGGGCCGACCAACACCAACGTGATGGATGTGCGGCTG GTTCTGGTAGGATCGAAAAA
Downstream 100 bases:
>100_bases TAAGATTTAGTACTACAACCGGCCCAACTTGTGAGATTCCTTACTAATATTCACTGCTGTTCAACGACTGAATTTTCTGA GAGCGCATCGCGGCTAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSFWRKEIIEFALDRETQGAIDEQRAWIVREPANAKPYYHLAQLYRVAFKEEEALGLLLESVRLDPNFGEAHASLAEMYV IREDYKAAWRHARAAGDNHVPHAIEMLTRHKVPSD
Sequences:
>Translated_115_residues MSFWRKEIIEFALDRETQGAIDEQRAWIVREPANAKPYYHLAQLYRVAFKEEEALGLLLESVRLDPNFGEAHASLAEMYV IREDYKAAWRHARAAGDNHVPHAIEMLTRHKVPSD >Mature_114_residues SFWRKEIIEFALDRETQGAIDEQRAWIVREPANAKPYYHLAQLYRVAFKEEEALGLLLESVRLDPNFGEAHASLAEMYVI REDYKAAWRHARAAGDNHVPHAIEMLTRHKVPSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13374; Mature: 13243
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFWRKEIIEFALDRETQGAIDEQRAWIVREPANAKPYYHLAQLYRVAFKEEEALGLLLE CCHHHHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SVRLDPNFGEAHASLAEMYVIREDYKAAWRHARAAGDNHVPHAIEMLTRHKVPSD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SFWRKEIIEFALDRETQGAIDEQRAWIVREPANAKPYYHLAQLYRVAFKEEEALGLLLE CHHHHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SVRLDPNFGEAHASLAEMYVIREDYKAAWRHARAAGDNHVPHAIEMLTRHKVPSD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA