| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ttuD [H]
Identifier: 116619906
GI number: 116619906
Start: 976860
End: 978155
Strand: Direct
Name: ttuD [H]
Synonym: Acid_0778
Alternate gene names: 116619906
Gene position: 976860-978155 (Clockwise)
Preceding gene: 116619905
Following gene: 116619907
Centisome position: 9.8
GC content: 67.52
Gene sequence:
>1296_bases ATGAGTGGGCTCCGGACCCTGCGCCGCCACGCAGCCGCGATCTTCCGCGCGTCGCTCCAGGCGGCCGACCCCGCAGGCGC CGTGGAACGCCACCTGGCGAGGTGCAATTACTCCCGCTATCGCAATATTTACGTGATCGGCGCGGGCAAGGCCGGCGCCT CGATGGCGCGCGCCGCGGAGCGCGTGCTCGGCAAGCGCATCACCGCAGGACTCATCAACGTGAAGGACGGCCATCTCGCC AAGCTGCGGCGCATCGAGTTGAATGAGTGCGGCCACCCGGTGCCGGACGAGCGCGGCGCGGCGGGCGCCCGCCGCATCGC AGCGATCGCGGAATCCGCGGGCCGCGAAGACCTGGTGGTGTGTCTGATCAGCGGCGGTGCGTCGGCCCTGCTGCCGCTGC CCGCCGCGGGAATTTCGCTGGAAGAGAAGCAGGCCACCACCCGGCTGCTGCTTTCCTGCGGCGCCACGATCCACGAAATA AACGCCGTTCGCAAACATATTTCGAGCATCAAAGGCGGCCAGCTGGCGCGGCTCGCAGCCCCAGCCGCGGTGGAAGCCTT GCTACTCTCCGACGTGATTGGCGATGACCTCGACGTGATCGGATCCGGCCCCACCGCGCCCGACGCCTCAACGTTCGCCA CTGCGGCAGGTATCTTCGAAAAGTACGCCATCACCGCGCGCATTCCCGCCTCCGTGCGCCAGCGCATCGAGCGCGGCATG CGCAGCGAGATTCCAGAAACACCGAAGCCGGACGACCCGTTGTTCGCGCGTGTGCGCAATACCGTGGTGGGCAGCAATCG CCTCGCGCTCGACGCGGCGGCCCGCGCCGCGAAGAGCCTGGGCTACCGGACGCTCGTGCTCTCCAGCGAGATCGAGGGGG AAACTCGCGAGATCGCGCGCATGCACGCCGCCATCGGCCGCGAGATCGCGCATACGGGGCGCCCCGTGCGTCCTCCCGCC TGCATCATCACTGGCGGCGAGACCACCGTCGCCATCAAGGGCGATGGATTGGGCGGACGCAATCAGGAGTTCGTGCTGGC GGCCGCGATCGACATTGCCGGCACCGGGAATATCGTGGTCTTCAGCGCAGGTACCGACGGTACCGATGGTCCGACCGACG CCGCCGGCGCCATCGCCGACGGCGAAACGCTGCGCCGCAAAGCCGATGCCCGCCAATACCTGGAGCGCAACGATTCGTAC CACTACTTCGAGGCGCTCGGCGACCTTGTGATCACAGGGCCGACCAACACCAACGTGATGGATGTGCGGCTGGTTCTGGT AGGATCGAAAAAGTGA
Upstream 100 bases:
>100_bases CGCGCCGCGCCGATTACGGGCGTGCCGCGGTGCAAGTCGTGATCGAGAGCGACGACCCGGACGTCACCGTCGGCGCCATT CTCGGACACCCCGAATTCCG
Downstream 100 bases:
>100_bases GTTTCTGGCGCAAAGAGATCATCGAATTCGCGTTGGATCGCGAGACCCAGGGGGCGATCGACGAGCAACGCGCCTGGATC GTCCGCGAACCGGCCAATGC
Product: glycerate 2-kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSGLRTLRRHAAAIFRASLQAADPAGAVERHLARCNYSRYRNIYVIGAGKAGASMARAAERVLGKRITAGLINVKDGHLA KLRRIELNECGHPVPDERGAAGARRIAAIAESAGREDLVVCLISGGASALLPLPAAGISLEEKQATTRLLLSCGATIHEI NAVRKHISSIKGGQLARLAAPAAVEALLLSDVIGDDLDVIGSGPTAPDASTFATAAGIFEKYAITARIPASVRQRIERGM RSEIPETPKPDDPLFARVRNTVVGSNRLALDAAARAAKSLGYRTLVLSSEIEGETREIARMHAAIGREIAHTGRPVRPPA CIITGGETTVAIKGDGLGGRNQEFVLAAAIDIAGTGNIVVFSAGTDGTDGPTDAAGAIADGETLRRKADARQYLERNDSY HYFEALGDLVITGPTNTNVMDVRLVLVGSKK
Sequences:
>Translated_431_residues MSGLRTLRRHAAAIFRASLQAADPAGAVERHLARCNYSRYRNIYVIGAGKAGASMARAAERVLGKRITAGLINVKDGHLA KLRRIELNECGHPVPDERGAAGARRIAAIAESAGREDLVVCLISGGASALLPLPAAGISLEEKQATTRLLLSCGATIHEI NAVRKHISSIKGGQLARLAAPAAVEALLLSDVIGDDLDVIGSGPTAPDASTFATAAGIFEKYAITARIPASVRQRIERGM RSEIPETPKPDDPLFARVRNTVVGSNRLALDAAARAAKSLGYRTLVLSSEIEGETREIARMHAAIGREIAHTGRPVRPPA CIITGGETTVAIKGDGLGGRNQEFVLAAAIDIAGTGNIVVFSAGTDGTDGPTDAAGAIADGETLRRKADARQYLERNDSY HYFEALGDLVITGPTNTNVMDVRLVLVGSKK >Mature_430_residues SGLRTLRRHAAAIFRASLQAADPAGAVERHLARCNYSRYRNIYVIGAGKAGASMARAAERVLGKRITAGLINVKDGHLAK LRRIELNECGHPVPDERGAAGARRIAAIAESAGREDLVVCLISGGASALLPLPAAGISLEEKQATTRLLLSCGATIHEIN AVRKHISSIKGGQLARLAAPAAVEALLLSDVIGDDLDVIGSGPTAPDASTFATAAGIFEKYAITARIPASVRQRIERGMR SEIPETPKPDDPLFARVRNTVVGSNRLALDAAARAAKSLGYRTLVLSSEIEGETREIARMHAAIGREIAHTGRPVRPPAC IITGGETTVAIKGDGLGGRNQEFVLAAAIDIAGTGNIVVFSAGTDGTDGPTDAAGAIADGETLRRKADARQYLERNDSYH YFEALGDLVITGPTNTNVMDVRLVLVGSKK
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=453, Percent_Identity=35.3200883002208, Blast_Score=241, Evalue=1e-63, Organism=Caenorhabditis elegans, GI193205461, Length=461, Percent_Identity=32.3210412147505, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI19920578, Length=437, Percent_Identity=32.9519450800915, Blast_Score=195, Evalue=6e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 45232; Mature: 45101
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLRTLRRHAAAIFRASLQAADPAGAVERHLARCNYSRYRNIYVIGAGKAGASMARAAE CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCEEEEEECCCCCHHHHHHHH RVLGKRITAGLINVKDGHLAKLRRIELNECGHPVPDERGAAGARRIAAIAESAGREDLVV HHHHHHHHHCEEECCCCCHHHHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE CLISGGASALLPLPAAGISLEEKQATTRLLLSCGATIHEINAVRKHISSIKGGQLARLAA EEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH PAAVEALLLSDVIGDDLDVIGSGPTAPDASTFATAAGIFEKYAITARIPASVRQRIERGM HHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH RSEIPETPKPDDPLFARVRNTVVGSNRLALDAAARAAKSLGYRTLVLSSEIEGETREIAR HHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH MHAAIGREIAHTGRPVRPPACIITGGETTVAIKGDGLGGRNQEFVLAAAIDIAGTGNIVV HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEE FSAGTDGTDGPTDAAGAIADGETLRRKADARQYLERNDSYHYFEALGDLVITGPTNTNVM EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCEE DVRLVLVGSKK EEEEEEEECCC >Mature Secondary Structure SGLRTLRRHAAAIFRASLQAADPAGAVERHLARCNYSRYRNIYVIGAGKAGASMARAAE CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCEEEEEECCCCCHHHHHHHH RVLGKRITAGLINVKDGHLAKLRRIELNECGHPVPDERGAAGARRIAAIAESAGREDLVV HHHHHHHHHCEEECCCCCHHHHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE CLISGGASALLPLPAAGISLEEKQATTRLLLSCGATIHEINAVRKHISSIKGGQLARLAA EEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH PAAVEALLLSDVIGDDLDVIGSGPTAPDASTFATAAGIFEKYAITARIPASVRQRIERGM HHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH RSEIPETPKPDDPLFARVRNTVVGSNRLALDAAARAAKSLGYRTLVLSSEIEGETREIAR HHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH MHAAIGREIAHTGRPVRPPACIITGGETTVAIKGDGLGGRNQEFVLAAAIDIAGTGNIVV HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEE FSAGTDGTDGPTDAAGAIADGETLRRKADARQYLERNDSYHYFEALGDLVITGPTNTNVM EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCEE DVRLVLVGSKK EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]