| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yflN [H]
Identifier: 116619869
GI number: 116619869
Start: 931714
End: 932514
Strand: Direct
Name: yflN [H]
Synonym: Acid_0741
Alternate gene names: 116619869
Gene position: 931714-932514 (Clockwise)
Preceding gene: 116619866
Following gene: 116619870
Centisome position: 9.35
GC content: 61.42
Gene sequence:
>801_bases ATGGAAAAACTTGCTTTGCCTGAATATGATGAAGTTCCGCTGGACCGGATCGCCCCAGGCGTCGCCGGCTTACGCATCCT CTTCGTGAACGTCTTTGGATTGACCGGGGACGACGGGAGTTGGGTGCTGGTGGATGCGGGGATTCCTTATTCCGCGAGCC GGATCAAGCGCTGGGTGTCCTCCGAATTCGGCGCGGCGCCGAGATTCATTCTGCTGTCGCACGGACATTTCGATCACACA GGCACGGTCAAGGAACTCGCCGCGGAGTGGGACGTGCCGGTCTACGCACACCCTGAGGAGGCGCCCTTCCTAACCGGCCA GCGGGCGTATCCGCCGCCGAATCCGAAGGTGGGCGGCGGAGTGATGGCGTTGATGTCCCCACTCTATCCGCGCGACCCCA TCGATATCGGGGATCGTTTGCGCATGTTGCAGGGCGACGGCACCATTCCAGGTTTTCCGGAATGGCGATGGATTCACACG CCCGGGCACACCGTAGGGCATGTCTCTTTGTACCGGGAAAGTGATCGCGTGTTGTTACCGGGCGACGCATTCTGCACCAC GGATCAGCGTTCATTCCTCGCTGTGGCTTCGCAGCGGCCCGAATTGCATGGGCCGCCGGAGTATTACACGCCGGACTGGG ATCAGGCGAAGCTTTCCGTGCAGAAACTGGCGGAACTGCGTCCTTCGTTAGTGGCTCCGGGTCACGGTTTGCCGATGTCG GGTGGTGAAGTGGAGCAGGCACTGCAAACTTTGGCGCGGGACTTCGACCGGATCGCCCGTCCCGAAGGCGTCGAAGCGTA G
Upstream 100 bases:
>100_bases GTGCAGACTCACTGCCAGCAGGCGAAATACTACAATTCGGAGGATCGTTTTCCATCGGTTGCCGCTAACAATGGCGCGAT GGGTGCAAGCGGTGGCTTGC
Downstream 100 bases:
>100_bases CTGTTGGGTATAAGTGCACAATCAGGCGGCAAACCAACAGCTGTTACTGCCCGGCAGCGGGCTGCGCGGAACACCAAATG CAACGAGAACAGCATGGCAA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MEKLALPEYDEVPLDRIAPGVAGLRILFVNVFGLTGDDGSWVLVDAGIPYSASRIKRWVSSEFGAAPRFILLSHGHFDHT GTVKELAAEWDVPVYAHPEEAPFLTGQRAYPPPNPKVGGGVMALMSPLYPRDPIDIGDRLRMLQGDGTIPGFPEWRWIHT PGHTVGHVSLYRESDRVLLPGDAFCTTDQRSFLAVASQRPELHGPPEYYTPDWDQAKLSVQKLAELRPSLVAPGHGLPMS GGEVEQALQTLARDFDRIARPEGVEA
Sequences:
>Translated_266_residues MEKLALPEYDEVPLDRIAPGVAGLRILFVNVFGLTGDDGSWVLVDAGIPYSASRIKRWVSSEFGAAPRFILLSHGHFDHT GTVKELAAEWDVPVYAHPEEAPFLTGQRAYPPPNPKVGGGVMALMSPLYPRDPIDIGDRLRMLQGDGTIPGFPEWRWIHT PGHTVGHVSLYRESDRVLLPGDAFCTTDQRSFLAVASQRPELHGPPEYYTPDWDQAKLSVQKLAELRPSLVAPGHGLPMS GGEVEQALQTLARDFDRIARPEGVEA >Mature_266_residues MEKLALPEYDEVPLDRIAPGVAGLRILFVNVFGLTGDDGSWVLVDAGIPYSASRIKRWVSSEFGAAPRFILLSHGHFDHT GTVKELAAEWDVPVYAHPEEAPFLTGQRAYPPPNPKVGGGVMALMSPLYPRDPIDIGDRLRMLQGDGTIPGFPEWRWIHT PGHTVGHVSLYRESDRVLLPGDAFCTTDQRSFLAVASQRPELHGPPEYYTPDWDQAKLSVQKLAELRPSLVAPGHGLPMS GGEVEQALQTLARDFDRIARPEGVEA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29247; Mature: 29247
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLALPEYDEVPLDRIAPGVAGLRILFVNVFGLTGDDGSWVLVDAGIPYSASRIKRWVS CCCCCCCCCCCCCHHHHCCCHHHHEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHH SEFGAAPRFILLSHGHFDHTGTVKELAAEWDVPVYAHPEEAPFLTGQRAYPPPNPKVGGG HHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH VMALMSPLYPRDPIDIGDRLRMLQGDGTIPGFPEWRWIHTPGHTVGHVSLYRESDRVLLP HHHHHCCCCCCCCCCHHHHEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEC GDAFCTTDQRSFLAVASQRPELHGPPEYYTPDWDQAKLSVQKLAELRPSLVAPGHGLPMS CCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC GGEVEQALQTLARDFDRIARPEGVEA CHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEKLALPEYDEVPLDRIAPGVAGLRILFVNVFGLTGDDGSWVLVDAGIPYSASRIKRWVS CCCCCCCCCCCCCHHHHCCCHHHHEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHH SEFGAAPRFILLSHGHFDHTGTVKELAAEWDVPVYAHPEEAPFLTGQRAYPPPNPKVGGG HHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH VMALMSPLYPRDPIDIGDRLRMLQGDGTIPGFPEWRWIHTPGHTVGHVSLYRESDRVLLP HHHHHCCCCCCCCCCHHHHEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEC GDAFCTTDQRSFLAVASQRPELHGPPEYYTPDWDQAKLSVQKLAELRPSLVAPGHGLPMS CCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC GGEVEQALQTLARDFDRIARPEGVEA CHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10972810; 11029430 [H]