| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619865
Identifier: 116619865
GI number: 116619865
Start: 925203
End: 925505
Strand: Direct
Name: 116619865
Synonym: Acid_0737
Alternate gene names: NA
Gene position: 925203-925505 (Clockwise)
Preceding gene: 116619862
Following gene: 116619866
Centisome position: 9.28
GC content: 57.76
Gene sequence:
>303_bases ATGGTACTTGTATCGGCCATGCACATTACCGCGGGCATCTGGGTCAACGATGCCGAAGACGGATTGATCGCCGATATCGA CGACTGGCTCGAAAAGCTGGCGCCCTTCCGCCGCGATTATCGCCATCATCGCACCGGCGAGACCAATGGCGACGCCCACC TGAAGAGCCTGTTGGTGCATCACGAAGTAATCATACCGGTCACTGCCGGCAAGCTCGATTTCGGTCCGTGGCAGGAGGTC TACTACGCCGAATTCGACGGACGGCGTCCGAAACGCGTCATTATTAAAGCGATGGGGGAGTGA
Upstream 100 bases:
>100_bases CACGGAATATCTTACGTTCGAAACATCCAAACCTAGAGAGTATCTTAATATCACATCTGAAGTACGACGTGTACTGGAGA AGAGTAACATTCAGGAAGGC
Downstream 100 bases:
>100_bases AAGGACAGCCCGCCCGGCGGCATTTCCCCATCGGAGACAATATGACACTTCGCATTCCGGTGACCCTGTTGCTGAGCGCT ACACTGGCCTTGCCGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MVLVSAMHITAGIWVNDAEDGLIADIDDWLEKLAPFRRDYRHHRTGETNGDAHLKSLLVHHEVIIPVTAGKLDFGPWQEV YYAEFDGRRPKRVIIKAMGE
Sequences:
>Translated_100_residues MVLVSAMHITAGIWVNDAEDGLIADIDDWLEKLAPFRRDYRHHRTGETNGDAHLKSLLVHHEVIIPVTAGKLDFGPWQEV YYAEFDGRRPKRVIIKAMGE >Mature_100_residues MVLVSAMHITAGIWVNDAEDGLIADIDDWLEKLAPFRRDYRHHRTGETNGDAHLKSLLVHHEVIIPVTAGKLDFGPWQEV YYAEFDGRRPKRVIIKAMGE
Specific function: Unknown
COG id: COG0432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0047 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001602 [H]
Pfam domain/function: PF01894 UPF0047 [H]
EC number: NA
Molecular weight: Translated: 11421; Mature: 11421
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLVSAMHITAGIWVNDAEDGLIADIDDWLEKLAPFRRDYRHHRTGETNGDAHLKSLLVH CEEEEEEEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH HEVIIPVTAGKLDFGPWQEVYYAEFDGRRPKRVIIKAMGE CEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC >Mature Secondary Structure MVLVSAMHITAGIWVNDAEDGLIADIDDWLEKLAPFRRDYRHHRTGETNGDAHLKSLLVH CEEEEEEEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH HEVIIPVTAGKLDFGPWQEVYYAEFDGRRPKRVIIKAMGE CEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]