| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619725
Identifier: 116619725
GI number: 116619725
Start: 727008
End: 729380
Strand: Direct
Name: 116619725
Synonym: Acid_0590
Alternate gene names: NA
Gene position: 727008-729380 (Clockwise)
Preceding gene: 116619724
Following gene: 116619729
Centisome position: 7.3
GC content: 62.33
Gene sequence:
>2373_bases ATGAAGCTTAGTCGGGTTTGGATCATCCGCGCCGCGGCGGTGATCGGAGTGCTCGGTGTGCTTGCGCTCGCCGGAACCGG ATACCGCCGCTGGAAAAAGCGCCCCGGCCCCGGCCGCATGGCAGACGAGGCGAGTCGTGCGCCGCGCACCCGTTTTGTCG CGCCCGACGAAGATTATTATCACGCCATGGATCGCGGCGCCAAACTGGACCTGGAAGAAAATCAGGGGCGCAATACCTGG ATGGTCTGGAGTGCCGGCAACGATCTTTTTTGGGATTGGCTGGCACACCAATCGGCAGGCAGTTTCGATCTGCTCAAGGT CGTCTCTTCCTATGATCCTGACAAGGACACGCGGCTTAGCAGCGACCAGCGGGAGCGCCTGCGGCAGATCTACAACTTTC GCCACGATAACCGCCTCGCCACTCTCGGCGCGGTCAACGAGCCCTGCTATGAACAGGCGGTTGAGGGCGATCCGCGCCGC TACGGCCTCTGGCTCGATCAGCGCAAGCTCGATTGCGTTCCGGACCCGTTCGCGAATGAGGAGAAATATCCCGGCGTGCC GATTGGATTGCGCGGCCGCCTAAATCCCCTCGGTAGCCAGTATGGCGCTCCCAGCGGAGTCATCGGCTTGCGCCTGTTTC CCAATCCGGATTTCCACGATGAGGCCGTCCTGAAGTGGAACGCCGTCCGCTACTACACCGACCCCTCGTATTACCTCTCG AAAGACCTGGTGCGCCCCTATCGCGTCGGCGTCACGTGCGCCTTCTGCCATGCCGGCCTGGATCCGGCCAGCCTGCCGGT GGACGTCAACGATCCGCAGTGGGAAAACATCAGTTCTACTACCGGCTCGCAATATCTGCGCATGGATCGCATTGGGATGT GGCAGGGCGATCCATCGCAGTTCGCTTACCAGTTGCTGCACGCGACCCGGCCCGGGTCGGTGGATATGTCGCTGGTGGCC ACCGATCACATCAATAATCCAACCGCCATCGGTGCCATTTTCCACGTGGCCGCCCGCATGGAAATGGCGCGCGCCACGGG AAAGGAGACCCTAGCCGGAGCCTCGCTGCAGAACCGCCAGATGAGCACCTACGTCGCCGGAGGTCCGCTGGCAGCGTTCT TTGAAGAGCCGGCCACGGTGTGGACCCCGCGCCTTGGCAGCGCCGCCATGGATTCCTCGGGCATTCTGGCCGGTGTGAAT CGCGCCTTCGCCGAACTCGGAATCTTCAGCGAGGAATGGCTGTTCCACTTCAATCCCCTCCTCGGCGGCAGACCGCAACT CCCCTTCGACCTGGGCGTCGCCAGAAGGAGTTCCGCTTACTGGAATCAGACCGAAACTCTTACCCCGAATGTCGTGCGCT TCCTCATGCGCGCCGAGGCGCCGCCGGTGCGGTCGGGTCCGCCGGTCGATCGAACCGCGTCCACGCGCGGGAAACTCGTC TTCGCAGAGCGCTGCGCCGGCTGCCACTCCAGCAAACTGCCCTCACCGCCGGCCGAGGCCGACCTGGGCAACTGTACAGG CAACTACCTCGATTGCTGGAATCGCTATTGGAACTGGACCCATAGCCAGGAGTTCCGCAGCCGGATGGAGAAGCTGGTGA TGGCAGACGATTTCCTCGATAAGAACTACCTCTCCACCGATTTGCGTGTTCCTCTTCAGGTCGTCGGAACCAACGCCTGC ACCGCGCTTGCGAGTAATGGCACCGCGGGTAACTTATGGGACGCCTTCACCTCGCAGACCTACAAGACACTGCCCTCGGC CGGAAGCATCACTTACTACGACCCGGAAACCGGGGCGAAGCGCGAAATGAAATTGCCTGGTGGCGGGCGGGGCTACGTGC GCCCGCCTTCGCTGGCCGGACTTTGGTTCAGCGCGCCGTACCTCAACAACAACTCGTTGGGCAGCTTTGAGCCGAACCCC TCGCCCGACGCCCGGCAGGCAGCCTTCCAAAGTGGCATGGAGCAGCTCTTGTGGCCGGAAAAACGCGAGAGGGACGAAAA ATTAGGCGACAAAATCCCTGGCAAAATCGATCGCACCACCGCAGTTAGTCGCCTGCAGCTGCCCGCGCGTGCCGTGCCCG GGGAATCGTCGGAGGACCTAGCTATCGGTCCGATACCGGCCGGCACTCCGGTGGGCCTGTTGGCGAATCTCGATTTGCTC TCGCCCAAAGCCCTGCCGTTGCTGCTCCGCATGAAGAAGGAGCTCAAGACCGAGGCCGACTTCGCCAAATTCACCGGCGA GCTCTTCGAGCTCAGTGCCTGCCCCGACTACGTCGTGAATCGCGGCCACTACTTCGGCACCGGCCTGGACGGCGACCTCG CCCTCACCGATCAACAAAAGCGAGACCTGATCGAATTCCTGAAGCTGTTCTGA
Upstream 100 bases:
>100_bases GAACCCGTCACGGCTCACGGAATTTGCGGTATGACCCGCCGCATCTCCAACCTGGGTTTGGCCATCGACGATCAGACCAC TTTCGTACGAGCGATCCGGC
Downstream 100 bases:
>100_bases TCCGGTAAGGGCAGATATAAGCCGGCGCTTACCTGGGCTTATAGGCGATGGCTTCGATCTCGACGTGAATCCCAGGGACT GCGAAGCCCGTGACCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MKLSRVWIIRAAAVIGVLGVLALAGTGYRRWKKRPGPGRMADEASRAPRTRFVAPDEDYYHAMDRGAKLDLEENQGRNTW MVWSAGNDLFWDWLAHQSAGSFDLLKVVSSYDPDKDTRLSSDQRERLRQIYNFRHDNRLATLGAVNEPCYEQAVEGDPRR YGLWLDQRKLDCVPDPFANEEKYPGVPIGLRGRLNPLGSQYGAPSGVIGLRLFPNPDFHDEAVLKWNAVRYYTDPSYYLS KDLVRPYRVGVTCAFCHAGLDPASLPVDVNDPQWENISSTTGSQYLRMDRIGMWQGDPSQFAYQLLHATRPGSVDMSLVA TDHINNPTAIGAIFHVAARMEMARATGKETLAGASLQNRQMSTYVAGGPLAAFFEEPATVWTPRLGSAAMDSSGILAGVN RAFAELGIFSEEWLFHFNPLLGGRPQLPFDLGVARRSSAYWNQTETLTPNVVRFLMRAEAPPVRSGPPVDRTASTRGKLV FAERCAGCHSSKLPSPPAEADLGNCTGNYLDCWNRYWNWTHSQEFRSRMEKLVMADDFLDKNYLSTDLRVPLQVVGTNAC TALASNGTAGNLWDAFTSQTYKTLPSAGSITYYDPETGAKREMKLPGGGRGYVRPPSLAGLWFSAPYLNNNSLGSFEPNP SPDARQAAFQSGMEQLLWPEKRERDEKLGDKIPGKIDRTTAVSRLQLPARAVPGESSEDLAIGPIPAGTPVGLLANLDLL SPKALPLLLRMKKELKTEADFAKFTGELFELSACPDYVVNRGHYFGTGLDGDLALTDQQKRDLIEFLKLF
Sequences:
>Translated_790_residues MKLSRVWIIRAAAVIGVLGVLALAGTGYRRWKKRPGPGRMADEASRAPRTRFVAPDEDYYHAMDRGAKLDLEENQGRNTW MVWSAGNDLFWDWLAHQSAGSFDLLKVVSSYDPDKDTRLSSDQRERLRQIYNFRHDNRLATLGAVNEPCYEQAVEGDPRR YGLWLDQRKLDCVPDPFANEEKYPGVPIGLRGRLNPLGSQYGAPSGVIGLRLFPNPDFHDEAVLKWNAVRYYTDPSYYLS KDLVRPYRVGVTCAFCHAGLDPASLPVDVNDPQWENISSTTGSQYLRMDRIGMWQGDPSQFAYQLLHATRPGSVDMSLVA TDHINNPTAIGAIFHVAARMEMARATGKETLAGASLQNRQMSTYVAGGPLAAFFEEPATVWTPRLGSAAMDSSGILAGVN RAFAELGIFSEEWLFHFNPLLGGRPQLPFDLGVARRSSAYWNQTETLTPNVVRFLMRAEAPPVRSGPPVDRTASTRGKLV FAERCAGCHSSKLPSPPAEADLGNCTGNYLDCWNRYWNWTHSQEFRSRMEKLVMADDFLDKNYLSTDLRVPLQVVGTNAC TALASNGTAGNLWDAFTSQTYKTLPSAGSITYYDPETGAKREMKLPGGGRGYVRPPSLAGLWFSAPYLNNNSLGSFEPNP SPDARQAAFQSGMEQLLWPEKRERDEKLGDKIPGKIDRTTAVSRLQLPARAVPGESSEDLAIGPIPAGTPVGLLANLDLL SPKALPLLLRMKKELKTEADFAKFTGELFELSACPDYVVNRGHYFGTGLDGDLALTDQQKRDLIEFLKLF >Mature_790_residues MKLSRVWIIRAAAVIGVLGVLALAGTGYRRWKKRPGPGRMADEASRAPRTRFVAPDEDYYHAMDRGAKLDLEENQGRNTW MVWSAGNDLFWDWLAHQSAGSFDLLKVVSSYDPDKDTRLSSDQRERLRQIYNFRHDNRLATLGAVNEPCYEQAVEGDPRR YGLWLDQRKLDCVPDPFANEEKYPGVPIGLRGRLNPLGSQYGAPSGVIGLRLFPNPDFHDEAVLKWNAVRYYTDPSYYLS KDLVRPYRVGVTCAFCHAGLDPASLPVDVNDPQWENISSTTGSQYLRMDRIGMWQGDPSQFAYQLLHATRPGSVDMSLVA TDHINNPTAIGAIFHVAARMEMARATGKETLAGASLQNRQMSTYVAGGPLAAFFEEPATVWTPRLGSAAMDSSGILAGVN RAFAELGIFSEEWLFHFNPLLGGRPQLPFDLGVARRSSAYWNQTETLTPNVVRFLMRAEAPPVRSGPPVDRTASTRGKLV FAERCAGCHSSKLPSPPAEADLGNCTGNYLDCWNRYWNWTHSQEFRSRMEKLVMADDFLDKNYLSTDLRVPLQVVGTNAC TALASNGTAGNLWDAFTSQTYKTLPSAGSITYYDPETGAKREMKLPGGGRGYVRPPSLAGLWFSAPYLNNNSLGSFEPNP SPDARQAAFQSGMEQLLWPEKRERDEKLGDKIPGKIDRTTAVSRLQLPARAVPGESSEDLAIGPIPAGTPVGLLANLDLL SPKALPLLLRMKKELKTEADFAKFTGELFELSACPDYVVNRGHYFGTGLDGDLALTDQQKRDLIEFLKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87593; Mature: 87593
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSRVWIIRAAAVIGVLGVLALAGTGYRRWKKRPGPGRMADEASRAPRTRFVAPDEDYY CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHCCCCCEECCCCHHHH HAMDRGAKLDLEENQGRNTWMVWSAGNDLFWDWLAHQSAGSFDLLKVVSSYDPDKDTRLS HHHCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC SDQRERLRQIYNFRHDNRLATLGAVNEPCYEQAVEGDPRRYGLWLDQRKLDCVPDPFANE CHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCEECEEECCCCCCCCCCCCCCC EKYPGVPIGLRGRLNPLGSQYGAPSGVIGLRLFPNPDFHDEAVLKWNAVRYYTDPSYYLS CCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCHHHH KDLVRPYRVGVTCAFCHAGLDPASLPVDVNDPQWENISSTTGSQYLRMDRIGMWQGDPSQ HHCCCHHHHCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCHHH FAYQLLHATRPGSVDMSLVATDHINNPTAIGAIFHVAARMEMARATGKETLAGASLQNRQ HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC MSTYVAGGPLAAFFEEPATVWTPRLGSAAMDSSGILAGVNRAFAELGIFSEEWLFHFNPL CEEEECCCCHHHHHCCCCCEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCC LGGRPQLPFDLGVARRSSAYWNQTETLTPNVVRFLMRAEAPPVRSGPPVDRTASTRGKLV CCCCCCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE FAERCAGCHSSKLPSPPAEADLGNCTGNYLDCWNRYWNWTHSQEFRSRMEKLVMADDFLD EHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KNYLSTDLRVPLQVVGTNACTALASNGTAGNLWDAFTSQTYKTLPSAGSITYYDPETGAK CCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC REMKLPGGGRGYVRPPSLAGLWFSAPYLNNNSLGSFEPNPSPDARQAAFQSGMEQLLWPE CEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH KRERDEKLGDKIPGKIDRTTAVSRLQLPARAVPGESSEDLAIGPIPAGTPVGLLANLDLL HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCC SPKALPLLLRMKKELKTEADFAKFTGELFELSACPDYVVNRGHYFGTGLDGDLALTDQQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCEEECCCCCCCEEECCHHH RDLIEFLKLF HHHHHHHHHC >Mature Secondary Structure MKLSRVWIIRAAAVIGVLGVLALAGTGYRRWKKRPGPGRMADEASRAPRTRFVAPDEDYY CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHCCCCCEECCCCHHHH HAMDRGAKLDLEENQGRNTWMVWSAGNDLFWDWLAHQSAGSFDLLKVVSSYDPDKDTRLS HHHCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC SDQRERLRQIYNFRHDNRLATLGAVNEPCYEQAVEGDPRRYGLWLDQRKLDCVPDPFANE CHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCEECEEECCCCCCCCCCCCCCC EKYPGVPIGLRGRLNPLGSQYGAPSGVIGLRLFPNPDFHDEAVLKWNAVRYYTDPSYYLS CCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCHHHH KDLVRPYRVGVTCAFCHAGLDPASLPVDVNDPQWENISSTTGSQYLRMDRIGMWQGDPSQ HHCCCHHHHCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCHHH FAYQLLHATRPGSVDMSLVATDHINNPTAIGAIFHVAARMEMARATGKETLAGASLQNRQ HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC MSTYVAGGPLAAFFEEPATVWTPRLGSAAMDSSGILAGVNRAFAELGIFSEEWLFHFNPL CEEEECCCCHHHHHCCCCCEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCC LGGRPQLPFDLGVARRSSAYWNQTETLTPNVVRFLMRAEAPPVRSGPPVDRTASTRGKLV CCCCCCCCHHHCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE FAERCAGCHSSKLPSPPAEADLGNCTGNYLDCWNRYWNWTHSQEFRSRMEKLVMADDFLD EHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KNYLSTDLRVPLQVVGTNACTALASNGTAGNLWDAFTSQTYKTLPSAGSITYYDPETGAK CCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC REMKLPGGGRGYVRPPSLAGLWFSAPYLNNNSLGSFEPNPSPDARQAAFQSGMEQLLWPE CEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH KRERDEKLGDKIPGKIDRTTAVSRLQLPARAVPGESSEDLAIGPIPAGTPVGLLANLDLL HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCC SPKALPLLLRMKKELKTEADFAKFTGELFELSACPDYVVNRGHYFGTGLDGDLALTDQQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCEEECCCCCCCEEECCHHH RDLIEFLKLF HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA