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The map label for this gene is 116619635

Identifier: 116619635

GI number: 116619635

Start: 607394

End: 608305

Strand: Direct

Name: 116619635

Synonym: Acid_0496

Alternate gene names: NA

Gene position: 607394-608305 (Clockwise)

Preceding gene: 116619634

Following gene: 116619636

Centisome position: 6.09

GC content: 62.39

Gene sequence:

>912_bases
GTGAAACCCCGAAGTGGAGGAGCCTTACCGGCTCCCGTCGCCGGATTTTTCGCGCTGCTGTTTATGGCAGGCGCCGCGCT
GGCCCAACCCGGCCAGTTGCTGGGCCCGCCGCAGCCCACGCGCACCATGCAGGATTCCAATCTCAAGCCGGCGCTGCCCG
GCGCGCTGCTCGGCGTCGGCATCGATCAGAAGCTCGATCAACAGGTCCCGCTCAATCTGACATTCAAAGACGAGGCCGGC
CGCGCAGTGCCGCTCTCCACGTATTTTCAGTCCGGTAAACCGGTGATCCTGGCCCTGGTTTATTACCGCTGCCCGATGCT
GTGCACCCAAATTCTCAACGGCGTGGCCGGCAGCCTCAAGGCGATCTCGCTTGACCCGGGTAAGGATTTCGAAGTGGTCG
CGGTCAGCTTCGATCCCAAGGACACGCCCGAGACCGCCGCATCCAAGAAGCAGATGTACCTGCGCCGTTATGCCCGGCCC
AACACTGCCAACGGCTGGCACCTGCTCACCGGCGACGAGGCCAATATCAAGGCGCTCACCGACGCCGTGGGCTATCACTA
CAAGTACGACCCGGCCACCGACCAGTTCGCCCATGCCAGCGGCATCATGGTGTTGACTCCCGAAGGGCGCCTCTCGCGCT
ACTTCTATGGCGTGGAATACCAGCCGCGCGACGTCAGGCTCGGCTTGGTGGAAGCTTCGCAAAACAAGATCGGTTCGCCG
GTCGATCAGATTCTGCTGTTCTGTTACCACTACGACCCGGTCACCGGCAAGTACGGCGCGGTTGTGATGAACCTGGTGCG
CTTCGCCGGCGCAACCTTCACGCTGGTCTGCGGCGTGTTCCTCTTCATCTTCCTGCGCCGTGATGTTCGCAGTGACCGGC
GCGCTCTTGAATACAACAGGCGGGTTGGATAG

Upstream 100 bases:

>100_bases
CGGAAGCCTCCGCGCCGCCTCCAGCGGCGGAACAGAAATCCGTGGTCGGCCCGAACAAAGGCCAGCCCGAACAGGTAAAC
ACCAAAGAGGTACAACGCAA

Downstream 100 bases:

>100_bases
CACACGATGGGTAAATTTCAATTGTTTCCGGTACAGGCCTCCACGCTCGCGCCCGAGGTGGATCACCTCCTGTACTTTCT
GCTCGCTGTCAGCACCTTCT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKPRSGGALPAPVAGFFALLFMAGAALAQPGQLLGPPQPTRTMQDSNLKPALPGALLGVGIDQKLDQQVPLNLTFKDEAG
RAVPLSTYFQSGKPVILALVYYRCPMLCTQILNGVAGSLKAISLDPGKDFEVVAVSFDPKDTPETAASKKQMYLRRYARP
NTANGWHLLTGDEANIKALTDAVGYHYKYDPATDQFAHASGIMVLTPEGRLSRYFYGVEYQPRDVRLGLVEASQNKIGSP
VDQILLFCYHYDPVTGKYGAVVMNLVRFAGATFTLVCGVFLFIFLRRDVRSDRRALEYNRRVG

Sequences:

>Translated_303_residues
MKPRSGGALPAPVAGFFALLFMAGAALAQPGQLLGPPQPTRTMQDSNLKPALPGALLGVGIDQKLDQQVPLNLTFKDEAG
RAVPLSTYFQSGKPVILALVYYRCPMLCTQILNGVAGSLKAISLDPGKDFEVVAVSFDPKDTPETAASKKQMYLRRYARP
NTANGWHLLTGDEANIKALTDAVGYHYKYDPATDQFAHASGIMVLTPEGRLSRYFYGVEYQPRDVRLGLVEASQNKIGSP
VDQILLFCYHYDPVTGKYGAVVMNLVRFAGATFTLVCGVFLFIFLRRDVRSDRRALEYNRRVG
>Mature_303_residues
MKPRSGGALPAPVAGFFALLFMAGAALAQPGQLLGPPQPTRTMQDSNLKPALPGALLGVGIDQKLDQQVPLNLTFKDEAG
RAVPLSTYFQSGKPVILALVYYRCPMLCTQILNGVAGSLKAISLDPGKDFEVVAVSFDPKDTPETAASKKQMYLRRYARP
NTANGWHLLTGDEANIKALTDAVGYHYKYDPATDQFAHASGIMVLTPEGRLSRYFYGVEYQPRDVRLGLVEASQNKIGSP
VDQILLFCYHYDPVTGKYGAVVMNLVRFAGATFTLVCGVFLFIFLRRDVRSDRRALEYNRRVG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33199; Mature: 33199

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRSGGALPAPVAGFFALLFMAGAALAQPGQLLGPPQPTRTMQDSNLKPALPGALLGVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECC
IDQKLDQQVPLNLTFKDEAGRAVPLSTYFQSGKPVILALVYYRCPMLCTQILNGVAGSLK
CCHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCE
AISLDPGKDFEVVAVSFDPKDTPETAASKKQMYLRRYARPNTANGWHLLTGDEANIKALT
EEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
DAVGYHYKYDPATDQFAHASGIMVLTPEGRLSRYFYGVEYQPRDVRLGLVEASQNKIGSP
HHHCCCEEECCCCCCHHHHCCEEEECCCCCHHHEEECCEECCCCEEEEEEECCCCCCCCC
VDQILLFCYHYDPVTGKYGAVVMNLVRFAGATFTLVCGVFLFIFLRRDVRSDRRALEYNR
HHHHHEEHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVG
CCC
>Mature Secondary Structure
MKPRSGGALPAPVAGFFALLFMAGAALAQPGQLLGPPQPTRTMQDSNLKPALPGALLGVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECC
IDQKLDQQVPLNLTFKDEAGRAVPLSTYFQSGKPVILALVYYRCPMLCTQILNGVAGSLK
CCHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCE
AISLDPGKDFEVVAVSFDPKDTPETAASKKQMYLRRYARPNTANGWHLLTGDEANIKALT
EEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
DAVGYHYKYDPATDQFAHASGIMVLTPEGRLSRYFYGVEYQPRDVRLGLVEASQNKIGSP
HHHCCCEEECCCCCCHHHHCCEEEECCCCCHHHEEECCEECCCCEEEEEEECCCCCCCCC
VDQILLFCYHYDPVTGKYGAVVMNLVRFAGATFTLVCGVFLFIFLRRDVRSDRRALEYNR
HHHHHEEHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA