| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619571
Identifier: 116619571
GI number: 116619571
Start: 534433
End: 535881
Strand: Direct
Name: 116619571
Synonym: Acid_0432
Alternate gene names: NA
Gene position: 534433-535881 (Clockwise)
Preceding gene: 116619570
Following gene: 116619572
Centisome position: 5.36
GC content: 59.63
Gene sequence:
>1449_bases ATGACGCCCAACAATACCGCAACCGGGGGACGTGGTTGGTTGTCCCCCCTCATCCACCTCTGCAACAACTGGATCAGCCT TCTCGGGGTGGTGCTTGTCACCACCACCACCGTGATCTGGCTCTTCCTTCTTCCCATCACGATGAAGGGCGAAACCGAGA ATCCCTACCTCGGAATGCTCGCCTTTCTGACCATCCCGGGCCCGTTTTTCGGGGGGCTGATTCTGATCCCGCTGGGCATG TGGCTCAAGCGCAAACGTGAAGGCCGCCAGCACATCTATCCGCCCGACTTCCCCAAACTTAGCTGGGACAATCCGGAATT GCGCAAGCTGGTCTATTTCGTCGGTATCACTACCGTGATCAATGTCGTGATCGGCAGCCAGTTGGGTTATAGCGCCGTCA ACTATATGGACTCTGTTACGTTCTGCGGGCAGACCTGCCATACCGTAATGCAGCCGGAATATACCGCCTATCAGAACTCC CCACACTCGCGCGTGGAATGCGTAAAGTGCCACATCGGTCCCGGCGCGGGATGGTTTGTGAAGAGTAAACTCTCCGGCGC ACGGCAGTTATTCGCAGTCGCGCTGCACACCTATCCCACACCGATACCGACGCCCGTGCATAACCTGCGCCCCGCCCGGG AGACTTGCGAAACCTGCCACTGGCCCCAGAAGTACGGCGAGGACCGGGTACGCGTGATTAACAAGTTCGCCGACGACGAA ACCAACAGCCTGACCAAGACCGTCCTGCTGATGAAGATCGGCGGCGGCAATCACGGCATCGGCATTCACGGCACGCACCT CGGACCCGGCGTTCACATTCGCTATGCGGCCACGGACGAGCAGCGCCAGAACATCCCCTGGGTCGAATACAACGGCGCCG GACGCCAGACTCTGTACACCACGGCCGAAGCCAAACCCAACGGCGGCGGAGCGCCCATCCGCGAGATGGATTGCATGGAT TGCCACAATCGTCCCGCGCACAGCTATGACCTTCCGGATCGCGGCATCGACAAAGCGATGGCCGCCGGCCTGATTTCCAA CACCCTGCCTTTCGCCAAGAAGAAGGGCGTCGAGATCCTCAAGGTCAATTACATGTCGCGCGACGAAGCCGCACAGAAGA TACCCGCGGCCTTCGTCAAGTACTACCAGGACACCTACCCCGCGCTCTATGCGCAGCGCCAGGCGGAGATCGCGCAATCC GGCAAGCAGTTGCTCGAGGTATGGAACCGCAACATCTTCCCGGAGATGAAGGTGACTTGGGGCGCCTACCCGATGAACAT CGGCCACACCGACTTCCCCGGCTGCTTCCGCTGCCACGATGGCGGACACAATGCCAAAGACGGTAAGAGCATCACGCAGG ATTGCAACGCCTGCCATAACCTGCTCGCGATGGACGAGGCCCAGCCCAAAATCCTCACCGATCTGGGCGTGGTGGAAAAA GCCAAATAA
Upstream 100 bases:
>100_bases CCACTGAACACCGCATTCCTGACCGGCAAGTCCGTCAAGAAGCAGGAATCAACGGAAAGCGAGAAACCGCAAGCACACGT TGCGGGAGACTAACTTACGC
Downstream 100 bases:
>100_bases CCGGCGCGGGGTGGTTTCGGACTGCCCCGCAACTCGTGTTATCGTCTTTACCGTATGCGACGGGCCTTCTTCGCCGTTGC CCTGTTGGCGCTGGCCTGCC
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome C Domain Protein; Cytochrome C; NapC/NirT Cytochrome C Domain Protein
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTPNNTATGGRGWLSPLIHLCNNWISLLGVVLVTTTTVIWLFLLPITMKGETENPYLGMLAFLTIPGPFFGGLILIPLGM WLKRKREGRQHIYPPDFPKLSWDNPELRKLVYFVGITTVINVVIGSQLGYSAVNYMDSVTFCGQTCHTVMQPEYTAYQNS PHSRVECVKCHIGPGAGWFVKSKLSGARQLFAVALHTYPTPIPTPVHNLRPARETCETCHWPQKYGEDRVRVINKFADDE TNSLTKTVLLMKIGGGNHGIGIHGTHLGPGVHIRYAATDEQRQNIPWVEYNGAGRQTLYTTAEAKPNGGGAPIREMDCMD CHNRPAHSYDLPDRGIDKAMAAGLISNTLPFAKKKGVEILKVNYMSRDEAAQKIPAAFVKYYQDTYPALYAQRQAEIAQS GKQLLEVWNRNIFPEMKVTWGAYPMNIGHTDFPGCFRCHDGGHNAKDGKSITQDCNACHNLLAMDEAQPKILTDLGVVEK AK
Sequences:
>Translated_482_residues MTPNNTATGGRGWLSPLIHLCNNWISLLGVVLVTTTTVIWLFLLPITMKGETENPYLGMLAFLTIPGPFFGGLILIPLGM WLKRKREGRQHIYPPDFPKLSWDNPELRKLVYFVGITTVINVVIGSQLGYSAVNYMDSVTFCGQTCHTVMQPEYTAYQNS PHSRVECVKCHIGPGAGWFVKSKLSGARQLFAVALHTYPTPIPTPVHNLRPARETCETCHWPQKYGEDRVRVINKFADDE TNSLTKTVLLMKIGGGNHGIGIHGTHLGPGVHIRYAATDEQRQNIPWVEYNGAGRQTLYTTAEAKPNGGGAPIREMDCMD CHNRPAHSYDLPDRGIDKAMAAGLISNTLPFAKKKGVEILKVNYMSRDEAAQKIPAAFVKYYQDTYPALYAQRQAEIAQS GKQLLEVWNRNIFPEMKVTWGAYPMNIGHTDFPGCFRCHDGGHNAKDGKSITQDCNACHNLLAMDEAQPKILTDLGVVEK AK >Mature_481_residues TPNNTATGGRGWLSPLIHLCNNWISLLGVVLVTTTTVIWLFLLPITMKGETENPYLGMLAFLTIPGPFFGGLILIPLGMW LKRKREGRQHIYPPDFPKLSWDNPELRKLVYFVGITTVINVVIGSQLGYSAVNYMDSVTFCGQTCHTVMQPEYTAYQNSP HSRVECVKCHIGPGAGWFVKSKLSGARQLFAVALHTYPTPIPTPVHNLRPARETCETCHWPQKYGEDRVRVINKFADDET NSLTKTVLLMKIGGGNHGIGIHGTHLGPGVHIRYAATDEQRQNIPWVEYNGAGRQTLYTTAEAKPNGGGAPIREMDCMDC HNRPAHSYDLPDRGIDKAMAAGLISNTLPFAKKKGVEILKVNYMSRDEAAQKIPAAFVKYYQDTYPALYAQRQAEIAQSG KQLLEVWNRNIFPEMKVTWGAYPMNIGHTDFPGCFRCHDGGHNAKDGKSITQDCNACHNLLAMDEAQPKILTDLGVVEKA K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53565; Mature: 53434
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS51008 MULTIHEME_CYTC L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNNTATGGRGWLSPLIHLCNNWISLLGVVLVTTTTVIWLFLLPITMKGETENPYLGML CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHH AFLTIPGPFFGGLILIPLGMWLKRKREGRQHIYPPDFPKLSWDNPELRKLVYFVGITTVI HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NVVIGSQLGYSAVNYMDSVTFCGQTCHTVMQPEYTAYQNSPHSRVECVKCHIGPGAGWFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCCCCHHH KSKLSGARQLFAVALHTYPTPIPTPVHNLRPARETCETCHWPQKYGEDRVRVINKFADDE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHCCCC TNSLTKTVLLMKIGGGNHGIGIHGTHLGPGVHIRYAATDEQRQNIPWVEYNGAGRQTLYT CHHHEEEEEEEEECCCCCCCCEEECCCCCCEEEEEECCCHHHCCCCEEEECCCCCEEEEE TAEAKPNGGGAPIREMDCMDCHNRPAHSYDLPDRGIDKAMAAGLISNTLPFAKKKGVEIL ECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEE KVNYMSRDEAAQKIPAAFVKYYQDTYPALYAQRQAEIAQSGKQLLEVWNRNIFPEMKVTW EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GAYPMNIGHTDFPGCFRCHDGGHNAKDGKSITQDCNACHNLLAMDEAQPKILTDLGVVEK CCEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHC AK CC >Mature Secondary Structure TPNNTATGGRGWLSPLIHLCNNWISLLGVVLVTTTTVIWLFLLPITMKGETENPYLGML CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHH AFLTIPGPFFGGLILIPLGMWLKRKREGRQHIYPPDFPKLSWDNPELRKLVYFVGITTVI HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NVVIGSQLGYSAVNYMDSVTFCGQTCHTVMQPEYTAYQNSPHSRVECVKCHIGPGAGWFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCCCCHHH KSKLSGARQLFAVALHTYPTPIPTPVHNLRPARETCETCHWPQKYGEDRVRVINKFADDE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHCCCC TNSLTKTVLLMKIGGGNHGIGIHGTHLGPGVHIRYAATDEQRQNIPWVEYNGAGRQTLYT CHHHEEEEEEEEECCCCCCCCEEECCCCCCEEEEEECCCHHHCCCCEEEECCCCCEEEEE TAEAKPNGGGAPIREMDCMDCHNRPAHSYDLPDRGIDKAMAAGLISNTLPFAKKKGVEIL ECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEE KVNYMSRDEAAQKIPAAFVKYYQDTYPALYAQRQAEIAQSGKQLLEVWNRNIFPEMKVTW EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GAYPMNIGHTDFPGCFRCHDGGHNAKDGKSITQDCNACHNLLAMDEAQPKILTDLGVVEK CCEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHC AK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA