| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619570
Identifier: 116619570
GI number: 116619570
Start: 532731
End: 534425
Strand: Direct
Name: 116619570
Synonym: Acid_0431
Alternate gene names: NA
Gene position: 532731-534425 (Clockwise)
Preceding gene: 116619569
Following gene: 116619571
Centisome position: 5.35
GC content: 61.42
Gene sequence:
>1695_bases ATGACGAACCGGGCATATTCCTCTTTTGGCCTGAGCCTCGGTTCGTTGCTTCTAGGCCTTTTCGCCGGGATTTCCGGCAC GCCGCTATACGCCGCGGGAACCGAGGCGCCGCCTCGCTGCACCTCCTGTCACGACCAGGGGCAGAAACTCGAGAAGAGCG CACATTCCAGCCTCACCTGCGATACCTGCCACGAGTCTCACGACAAGGTTCCGCACCCTGCCAATATCCCCAAGCCGGCC TGCGTCACGTGTCACGCCGATCAGGCCGGCGACTATGAGAAGGGCGTCCATGGGCAGGCCCGCAAGGGCGGAAATGAAGG CGCGCCCGATTGCGCGCTCTGCCACGGCAGCGCCCACGAGCTGCTGGCCCCCAAATCGCAGGCCTTCCGCACCGCCGTCC CCGATACCTGCGGGATGTGCCACACCGACGTAGTCACGCAGTTCCGCGCCAGCGTTCACGGACAAGCCCTCGCGCGCGGC ATCACCCAGGCTCCCCTGTGCACGGATTGCCACGGCGAACACAAGATTCTTAAGCACACCAACACCGAAAGCAGCGTCAA CAACGCTCACATCCGCGATACCTGCGGCAGCTGCCACGGCAACGTCCGGCTGACGAAAAAATTCGGCATGCCGAGCGATC GCCTCGTGAGCTTCGATTCCTCTTTCCACGGCCTCGCCGCGAAGAGCGGATCGCAGACCGTGGCCAATTGCGCCAGTTGC CACGGCGTCCACAACATCCTCCCCCCTGGGGACGCCAACAGCATGGTCAACGCCAAGAACCTTCCCAAAACGTGCGGACA GTGCCATCCCGGCGCCGGCACCCGCTTCGCCATCAGCCAGATCCACGTAGCGGAAGGCACCACCGAACCAGACGCTCTCA AATGGGTGCGCCAGTTCTACCTGCTGATCATTCCCGTCACCATCGGTCTGATGCTGCTCCACCAGGGCGGCGACTGGATA CGCAAGCTGGTCCGCCTGCGCTTCCAACAGCGAGTCCGTGCGGCGCGCGCGATTTCCCCTGGCGGCAGCCATGGCCACGA CGTCCGCATGCTGCCCTTCGAACGCGTCCAGCACGCGGTGCTCGCACTCTCTTTCCTCACGCTGGTCTGGACCGGCTTTG CTTTGAAGTATCCCGACCAGTGGTGGGCGCGCCCGCTCCTCTTGATGGAGGGCCGCTACTCGATGCGCAGCCTGATTCAT CGCGTCGCGGCGGCGGTTTTCATCGGAGTATCGGTGACCCACCTAATTTCCCTCATCGTCAACCGCAAATTGCGCGAACA TTGGAAGGAAATGCTGCCCAATATGAACGATCCGCGGGAGGCGCTTTCCAACTTCGCTTACAACCTTGGGCTCGGCGATA AGCCTCCAGGACGTTCGGCGCATAGCTACATCGAGAAGGCCGAATACTGGGCCGTGGTCTGGGGCGCTATTGTCATGATT GCTTCCGGCACGCTTTTGTGGGCAAATAACCTTGCCATGAAGCTGCTGCCGAAGGCCTGGCTCGATATCTCGACCTCGGT CCACTTCTATGAGGCTTTGCTGGCTACGCTTGCCATCGTGGTCTGGCATTTCTACTCGATCATCTTCGACCCGGATGTAT ATCCACTGAACACCGCATTCCTGACCGGCAAGTCCGTCAAGAAGCAGGAATCAACGGAAAGCGAGAAACCGCAAGCACAC GTTGCGGGAGACTAA
Upstream 100 bases:
>100_bases AAAATCATGACGGTGGTTGCCGTCCTTCTCGGCCTTCTGGTGGCTGCTGCTTACGTTTACGGGCAGTTCGTCGGAAGAGC TTCCATGGGAGTTTAGCCGC
Downstream 100 bases:
>100_bases CTTACGCATGACGCCCAACAATACCGCAACCGGGGGACGTGGTTGGTTGTCCCCCCTCATCCACCTCTGCAACAACTGGA TCAGCCTTCTCGGGGTGGTG
Product: cytochrome b subunit of formate dehydrogenase-like protein
Products: NA
Alternate protein names: Cytochrome B Subunit Of Formate Dehydrogenase-Like Protein; Deca-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome-Like Protein; Cytochrome B/B6 Domain; Cytochrome B Subunit Of Formate Dehydrogenase-Like; Deca-Heme C-Type Cytochrome-Like; FfdnI Cytochromesubunit B Of Formate Dehydrogenase; Cytochrome C
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTNRAYSSFGLSLGSLLLGLFAGISGTPLYAAGTEAPPRCTSCHDQGQKLEKSAHSSLTCDTCHESHDKVPHPANIPKPA CVTCHADQAGDYEKGVHGQARKGGNEGAPDCALCHGSAHELLAPKSQAFRTAVPDTCGMCHTDVVTQFRASVHGQALARG ITQAPLCTDCHGEHKILKHTNTESSVNNAHIRDTCGSCHGNVRLTKKFGMPSDRLVSFDSSFHGLAAKSGSQTVANCASC HGVHNILPPGDANSMVNAKNLPKTCGQCHPGAGTRFAISQIHVAEGTTEPDALKWVRQFYLLIIPVTIGLMLLHQGGDWI RKLVRLRFQQRVRAARAISPGGSHGHDVRMLPFERVQHAVLALSFLTLVWTGFALKYPDQWWARPLLLMEGRYSMRSLIH RVAAAVFIGVSVTHLISLIVNRKLREHWKEMLPNMNDPREALSNFAYNLGLGDKPPGRSAHSYIEKAEYWAVVWGAIVMI ASGTLLWANNLAMKLLPKAWLDISTSVHFYEALLATLAIVVWHFYSIIFDPDVYPLNTAFLTGKSVKKQESTESEKPQAH VAGD
Sequences:
>Translated_564_residues MTNRAYSSFGLSLGSLLLGLFAGISGTPLYAAGTEAPPRCTSCHDQGQKLEKSAHSSLTCDTCHESHDKVPHPANIPKPA CVTCHADQAGDYEKGVHGQARKGGNEGAPDCALCHGSAHELLAPKSQAFRTAVPDTCGMCHTDVVTQFRASVHGQALARG ITQAPLCTDCHGEHKILKHTNTESSVNNAHIRDTCGSCHGNVRLTKKFGMPSDRLVSFDSSFHGLAAKSGSQTVANCASC HGVHNILPPGDANSMVNAKNLPKTCGQCHPGAGTRFAISQIHVAEGTTEPDALKWVRQFYLLIIPVTIGLMLLHQGGDWI RKLVRLRFQQRVRAARAISPGGSHGHDVRMLPFERVQHAVLALSFLTLVWTGFALKYPDQWWARPLLLMEGRYSMRSLIH RVAAAVFIGVSVTHLISLIVNRKLREHWKEMLPNMNDPREALSNFAYNLGLGDKPPGRSAHSYIEKAEYWAVVWGAIVMI ASGTLLWANNLAMKLLPKAWLDISTSVHFYEALLATLAIVVWHFYSIIFDPDVYPLNTAFLTGKSVKKQESTESEKPQAH VAGD >Mature_563_residues TNRAYSSFGLSLGSLLLGLFAGISGTPLYAAGTEAPPRCTSCHDQGQKLEKSAHSSLTCDTCHESHDKVPHPANIPKPAC VTCHADQAGDYEKGVHGQARKGGNEGAPDCALCHGSAHELLAPKSQAFRTAVPDTCGMCHTDVVTQFRASVHGQALARGI TQAPLCTDCHGEHKILKHTNTESSVNNAHIRDTCGSCHGNVRLTKKFGMPSDRLVSFDSSFHGLAAKSGSQTVANCASCH GVHNILPPGDANSMVNAKNLPKTCGQCHPGAGTRFAISQIHVAEGTTEPDALKWVRQFYLLIIPVTIGLMLLHQGGDWIR KLVRLRFQQRVRAARAISPGGSHGHDVRMLPFERVQHAVLALSFLTLVWTGFALKYPDQWWARPLLLMEGRYSMRSLIHR VAAAVFIGVSVTHLISLIVNRKLREHWKEMLPNMNDPREALSNFAYNLGLGDKPPGRSAHSYIEKAEYWAVVWGAIVMIA SGTLLWANNLAMKLLPKAWLDISTSVHFYEALLATLAIVVWHFYSIIFDPDVYPLNTAFLTGKSVKKQESTESEKPQAHV AGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61511; Mature: 61380
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRAYSSFGLSLGSLLLGLFAGISGTPLYAAGTEAPPRCTSCHDQGQKLEKSAHSSLTC CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCH DTCHESHDKVPHPANIPKPACVTCHADQAGDYEKGVHGQARKGGNEGAPDCALCHGSAHE HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCHHCCCCCCCCCCEEECCCHHH LLAPKSQAFRTAVPDTCGMCHTDVVTQFRASVHGQALARGITQAPLCTDCHGEHKILKHT HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC NTESSVNNAHIRDTCGSCHGNVRLTKKFGMPSDRLVSFDSSFHGLAAKSGSQTVANCASC CCCCCCCCCCHHHHCCCCCCCEEEEEECCCCHHHEEECCCCCCCHHCCCCCHHHHHHHHH HGVHNILPPGDANSMVNAKNLPKTCGQCHPGAGTRFAISQIHVAEGTTEPDALKWVRQFY CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH LLIIPVTIGLMLLHQGGDWIRKLVRLRFQQRVRAARAISPGGSHGHDVRMLPFERVQHAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHH LALSFLTLVWTGFALKYPDQWWARPLLLMEGRYSMRSLIHRVAAAVFIGVSVTHLISLIV HHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRKLREHWKEMLPNMNDPREALSNFAYNLGLGDKPPGRSAHSYIEKAEYWAVVWGAIVMI HHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASGTLLWANNLAMKLLPKAWLDISTSVHFYEALLATLAIVVWHFYSIIFDPDVYPLNTAF HCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHE LTGKSVKKQESTESEKPQAHVAGD ECCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TNRAYSSFGLSLGSLLLGLFAGISGTPLYAAGTEAPPRCTSCHDQGQKLEKSAHSSLTC CCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCH DTCHESHDKVPHPANIPKPACVTCHADQAGDYEKGVHGQARKGGNEGAPDCALCHGSAHE HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCHHCCCCCCCCCCEEECCCHHH LLAPKSQAFRTAVPDTCGMCHTDVVTQFRASVHGQALARGITQAPLCTDCHGEHKILKHT HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC NTESSVNNAHIRDTCGSCHGNVRLTKKFGMPSDRLVSFDSSFHGLAAKSGSQTVANCASC CCCCCCCCCCHHHHCCCCCCCEEEEEECCCCHHHEEECCCCCCCHHCCCCCHHHHHHHHH HGVHNILPPGDANSMVNAKNLPKTCGQCHPGAGTRFAISQIHVAEGTTEPDALKWVRQFY CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH LLIIPVTIGLMLLHQGGDWIRKLVRLRFQQRVRAARAISPGGSHGHDVRMLPFERVQHAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHH LALSFLTLVWTGFALKYPDQWWARPLLLMEGRYSMRSLIHRVAAAVFIGVSVTHLISLIV HHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRKLREHWKEMLPNMNDPREALSNFAYNLGLGDKPPGRSAHSYIEKAEYWAVVWGAIVMI HHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASGTLLWANNLAMKLLPKAWLDISTSVHFYEALLATLAIVVWHFYSIIFDPDVYPLNTAF HCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHE LTGKSVKKQESTESEKPQAHVAGD ECCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA