| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619405
Identifier: 116619405
GI number: 116619405
Start: 349104
End: 350888
Strand: Direct
Name: 116619405
Synonym: Acid_0264
Alternate gene names: NA
Gene position: 349104-350888 (Clockwise)
Preceding gene: 116619399
Following gene: 116619406
Centisome position: 3.5
GC content: 63.31
Gene sequence:
>1785_bases GTGCATCGCCTTGTAGTTCTGGCGGCTCTTGCGCTGGCCGCCGATTTGTCTGCCCAAACTGCGCTTTTCCCCCTCAAGGA TGTCAAACCCGGAATGCGCGGCATTGGCCGCACTGTCTTCAACGGGAACAAAATCGAGGAGTTCGATGTCGAAATCCTCG GTGTGCTCGATAACATTGGACCCAAGGAATCGCTCATCCTCGCCCGCCTCTCCGGCGGACCGCTCGAACACACCGGCGTC ATGCAGGGTATGAGCGGCAGCCCCGTCTACATTGATGGAAAGCTCGCCGGTGCGGTCGCAATGGCCTTTCCGTTCGCCAA GGATCCCATCGCCGGGATCCGGCCCATCGAAGCCATGGTGCGGACCTCCACTTCGGCCGCGCCATCCTCTTCCCCGCCGG CGGCGGCCGCCGGACAGCGCGCCGCATTCGCGCTCGCCGAGCGCGATCTCACGCGCCGAATTCCCCGGCCCGAGCCCGCC ATGTCCGGCGAGGCCCGCATGGTTGACATCGCCACCCCGATCTCCTTCGGCGGCTTCAGCCGCGCCACGCTCGATACCTT CGCGCCGCAGCTCCGCGCGCTCGGACTCGAACCACGCCAGGGCGTCACCAGCGGCGCCAAGATCGAGCGTGCCATGGGCA ATCCCGCCGACCTCAAGCCCGGCTCCATGATCAGCGTGCAGCTCATGGCCGGCGACCTCTCGGTCGGCGCCGATGGCACC GTCACCCACATCGATGGCGAGCGCATCTACGCTTTCGGCCATCGCTTCCTCGATATCGGCGCTACCGCCCTGCCGTTCGC CCGCGCAGAGGTGCTCACCCTGCTCGCCAATACCAACACCTCCTTCAAGATCTCGAGCGCCAAGGAATGGATGGGGACCA TCTACCAGGACCGCAATACCGCCGTCGCCGGCGAGCTCGGCAAACGGCCCCCCATGGTCCCGGTTTCGCTTAGCCTCTCC CGCTCTGGCAAAGCCATCGAGTCCTACCAGATGCAGATGGTCAACGATACTCTGCTCTCGCCGCTGCTTTTGCAAATGGC CGTCTTCAGCGCCATCGATGCCACTGAACGCACGGCAGGCGCCAGCAGCATACGTGTCACCGGCGATATCGAATTTGAGA ACGCGCCGGGCCTGCTGCGCATCAATAATATGTACTCCGCCGATAACGGAAGCGCTATGCAGGCATCTCTCTCCGCGGCC GTCCCCGTCGCTTATGTGATGCAGGGAGGGTTTGAACGCCTCAAGCTCAAGCGCGTGGATTTGAAGCTCGAGGCATTCGA CCAGAAAAAGCAGCTCTCGATCGATAGCGTCACCACCTCGCGCCGCGACGTTCGCGCGGGCGAGAAGGTGGAGCTCGCCA TCTCTCTCACTGGCGAGAACGGCGCCGAGACCATTCGCAGGCTTGAATACCAGGTGCCCATCGGCATGGAGCCCGGCACT CTCTACTTCACCGTCGCCGACGCCAACGTCACCAACATCGCCGATTTCCGGCAGGTGCTCACCACCACGCCGCGCAGCCC GGTGCAGCTGGTCTCCACCGTTAACAATCTTCACGGCAACAATAAGGCATACGTGCGCGTGTGGCGCGCCGACCCCGCCT ACCAACTCGAAGGCAGCGACCTTCCCGACCCGCCGGCATCCGTGGCGCTGATCCTCGGCAGTTCGCAATCCAGCTCTCCG GGTATCACGCAGACCCGTAACTCTAAGATCGGAGAGATGGAAATCGACGCCGGCGACATGGTGATCTCCGGCAGCAAAAC CGTCCAGGTGGAAGTAAAGGAATGA
Upstream 100 bases:
>100_bases TACCAGACTGCTCCACCCCGCAGAACCATCCTAGCGTATGGCAGCCCCCCGGTCAAACTCTCGTCAGAGAATTGTTCCGC CGCCCTAGTACAATAGAAAG
Downstream 100 bases:
>100_bases TGCTCTCGATTCGACGACTCGCCTCCACAGCCGCCCTGTGCGCGCTGCTGATGCCCGCGGCTTTCGCGAGCGGCACCGCT ACCTGGGAGCTCAACTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MHRLVVLAALALAADLSAQTALFPLKDVKPGMRGIGRTVFNGNKIEEFDVEILGVLDNIGPKESLILARLSGGPLEHTGV MQGMSGSPVYIDGKLAGAVAMAFPFAKDPIAGIRPIEAMVRTSTSAAPSSSPPAAAAGQRAAFALAERDLTRRIPRPEPA MSGEARMVDIATPISFGGFSRATLDTFAPQLRALGLEPRQGVTSGAKIERAMGNPADLKPGSMISVQLMAGDLSVGADGT VTHIDGERIYAFGHRFLDIGATALPFARAEVLTLLANTNTSFKISSAKEWMGTIYQDRNTAVAGELGKRPPMVPVSLSLS RSGKAIESYQMQMVNDTLLSPLLLQMAVFSAIDATERTAGASSIRVTGDIEFENAPGLLRINNMYSADNGSAMQASLSAA VPVAYVMQGGFERLKLKRVDLKLEAFDQKKQLSIDSVTTSRRDVRAGEKVELAISLTGENGAETIRRLEYQVPIGMEPGT LYFTVADANVTNIADFRQVLTTTPRSPVQLVSTVNNLHGNNKAYVRVWRADPAYQLEGSDLPDPPASVALILGSSQSSSP GITQTRNSKIGEMEIDAGDMVISGSKTVQVEVKE
Sequences:
>Translated_594_residues MHRLVVLAALALAADLSAQTALFPLKDVKPGMRGIGRTVFNGNKIEEFDVEILGVLDNIGPKESLILARLSGGPLEHTGV MQGMSGSPVYIDGKLAGAVAMAFPFAKDPIAGIRPIEAMVRTSTSAAPSSSPPAAAAGQRAAFALAERDLTRRIPRPEPA MSGEARMVDIATPISFGGFSRATLDTFAPQLRALGLEPRQGVTSGAKIERAMGNPADLKPGSMISVQLMAGDLSVGADGT VTHIDGERIYAFGHRFLDIGATALPFARAEVLTLLANTNTSFKISSAKEWMGTIYQDRNTAVAGELGKRPPMVPVSLSLS RSGKAIESYQMQMVNDTLLSPLLLQMAVFSAIDATERTAGASSIRVTGDIEFENAPGLLRINNMYSADNGSAMQASLSAA VPVAYVMQGGFERLKLKRVDLKLEAFDQKKQLSIDSVTTSRRDVRAGEKVELAISLTGENGAETIRRLEYQVPIGMEPGT LYFTVADANVTNIADFRQVLTTTPRSPVQLVSTVNNLHGNNKAYVRVWRADPAYQLEGSDLPDPPASVALILGSSQSSSP GITQTRNSKIGEMEIDAGDMVISGSKTVQVEVKE >Mature_594_residues MHRLVVLAALALAADLSAQTALFPLKDVKPGMRGIGRTVFNGNKIEEFDVEILGVLDNIGPKESLILARLSGGPLEHTGV MQGMSGSPVYIDGKLAGAVAMAFPFAKDPIAGIRPIEAMVRTSTSAAPSSSPPAAAAGQRAAFALAERDLTRRIPRPEPA MSGEARMVDIATPISFGGFSRATLDTFAPQLRALGLEPRQGVTSGAKIERAMGNPADLKPGSMISVQLMAGDLSVGADGT VTHIDGERIYAFGHRFLDIGATALPFARAEVLTLLANTNTSFKISSAKEWMGTIYQDRNTAVAGELGKRPPMVPVSLSLS RSGKAIESYQMQMVNDTLLSPLLLQMAVFSAIDATERTAGASSIRVTGDIEFENAPGLLRINNMYSADNGSAMQASLSAA VPVAYVMQGGFERLKLKRVDLKLEAFDQKKQLSIDSVTTSRRDVRAGEKVELAISLTGENGAETIRRLEYQVPIGMEPGT LYFTVADANVTNIADFRQVLTTTPRSPVQLVSTVNNLHGNNKAYVRVWRADPAYQLEGSDLPDPPASVALILGSSQSSSP GITQTRNSKIGEMEIDAGDMVISGSKTVQVEVKE
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63143; Mature: 63143
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLVVLAALALAADLSAQTALFPLKDVKPGMRGIGRTVFNGNKIEEFDVEILGVLDNIG CCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHCHHHCCCCCEEECCCEEEEHHHCCC PKESLILARLSGGPLEHTGVMQGMSGSPVYIDGKLAGAVAMAFPFAKDPIAGIRPIEAMV CCCEEEEEEECCCCCCCHHHHCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHH RTSTSAAPSSSPPAAAAGQRAAFALAERDLTRRIPRPEPAMSGEARMVDIATPISFGGFS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC RATLDTFAPQLRALGLEPRQGVTSGAKIERAMGNPADLKPGSMISVQLMAGDLSVGADGT HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCCE VTHIDGERIYAFGHRFLDIGATALPFARAEVLTLLANTNTSFKISSAKEWMGTIYQDRNT EEEECCCEEEEECCHHEECCCHHCCHHHHHHEEEEECCCCCEEECCHHHHHHHHHCCCCC AVAGELGKRPPMVPVSLSLSRSGKAIESYQMQMVNDTLLSPLLLQMAVFSAIDATERTAG EEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC ASSIRVTGDIEFENAPGLLRINNMYSADNGSAMQASLSAAVPVAYVMQGGFERLKLKRVD CCEEEEEEEEEECCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEE LKLEAFDQKKQLSIDSVTTSRRDVRAGEKVELAISLTGENGAETIRRLEYQVPIGMEPGT EEEEECCCCCCCEEHHHCCCHHHCCCCCEEEEEEEEECCCHHHHHHHHHEECCCCCCCCE LYFTVADANVTNIADFRQVLTTTPRSPVQLVSTVNNLHGNNKAYVRVWRADPAYQLEGSD EEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCC LPDPPASVALILGSSQSSSPGITQTRNSKIGEMEIDAGDMVISGSKTVQVEVKE CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEEECC >Mature Secondary Structure MHRLVVLAALALAADLSAQTALFPLKDVKPGMRGIGRTVFNGNKIEEFDVEILGVLDNIG CCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHCHHHCCCCCEEECCCEEEEHHHCCC PKESLILARLSGGPLEHTGVMQGMSGSPVYIDGKLAGAVAMAFPFAKDPIAGIRPIEAMV CCCEEEEEEECCCCCCCHHHHCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHH RTSTSAAPSSSPPAAAAGQRAAFALAERDLTRRIPRPEPAMSGEARMVDIATPISFGGFS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC RATLDTFAPQLRALGLEPRQGVTSGAKIERAMGNPADLKPGSMISVQLMAGDLSVGADGT HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCCE VTHIDGERIYAFGHRFLDIGATALPFARAEVLTLLANTNTSFKISSAKEWMGTIYQDRNT EEEECCCEEEEECCHHEECCCHHCCHHHHHHEEEEECCCCCEEECCHHHHHHHHHCCCCC AVAGELGKRPPMVPVSLSLSRSGKAIESYQMQMVNDTLLSPLLLQMAVFSAIDATERTAG EEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC ASSIRVTGDIEFENAPGLLRINNMYSADNGSAMQASLSAAVPVAYVMQGGFERLKLKRVD CCEEEEEEEEEECCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEE LKLEAFDQKKQLSIDSVTTSRRDVRAGEKVELAISLTGENGAETIRRLEYQVPIGMEPGT EEEEECCCCCCCEEHHHCCCHHHCCCCCEEEEEEEEECCCHHHHHHHHHEECCCCCCCCE LYFTVADANVTNIADFRQVLTTTPRSPVQLVSTVNNLHGNNKAYVRVWRADPAYQLEGSD EEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCC LPDPPASVALILGSSQSSSPGITQTRNSKIGEMEIDAGDMVISGSKTVQVEVKE CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA