| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is pcaK [H]
Identifier: 116619395
GI number: 116619395
Start: 338034
End: 339401
Strand: Direct
Name: pcaK [H]
Synonym: Acid_0254
Alternate gene names: 116619395
Gene position: 338034-339401 (Clockwise)
Preceding gene: 116619394
Following gene: 116619398
Centisome position: 3.39
GC content: 66.01
Gene sequence:
>1368_bases GTGAGCGCCCCGGTCGAGATCGGCTCGCTGCTGGATCGCGGCCGATGGACGCCGTACCAGAGACTACTCACCGCGCTCGC CGCGCTGGCAGTTATCTTCGATGGCTTCGACATTCAGATTCTCGGCTTCGCGATTCCGTCGCTGATGAAGGAGTGGGGCG TCGCGCGGCCGGCATTCGGTCCGGTGTTGGCTCTCGGGCTGGCAGGGATGGCGGCCGGGAGTCCGTTTGCCGGCTACTGG GGCGATCGATGGGGACGCCGTCCCGCGCTGATCGGCTGCGTCGCTCTCTTCGGCCTGGCGACGGTCGCGACGTCGTCTGT CCATTCGGTGTTCGCGCTCGCTGTTTTGCGTTTTGTCACTGGATTGGGCGCCGGCGGAGCGGTGCCGAACGCCACCGCGT TCGCGGCTGAGTTCGCGCCCTTGCGGCAGCGCGCCGTGGCGGTGAAGCTGACCATCGTTTGCGTTCCCCTGGGAGGAATG CTGGGCGGTCTGATCGCGGCGCAGGTGCTTCCCGCGCTGGGCTGGCGCGCGCTGTATCAGATTGGTGGGGCGCTGCCGCT GGCGTTCGCGGCCATACTTTGGACGGTGCTCCCGGAGTCGCCCAGCTTTCTGGCGCAACGTCCGCAAAGATGGCCGGCGC TGGAGCAACTTCTGCGGCGGATGAGCCGCGCCGTCCCGGCCGGCAGCAGCTTCGAAGATCAGCGTGAAAGCGGGTCGGTC CGCCGCGCACCCATCCGCGAACTGCTCGGGTCCCGGCACTTGCGCGATACCGTTGGCTTGTGGCTCGCTTTCTTTTTCTG CCTGGGTGCCATTTACCTGGTGTTTGGCTGGCTGCCTGCCATGTTGACCTCGCAAGGGATGGACGTTGCCGGCGCCAGTC GAGGTCTCGCTCTCTACAATTTTGGCGGCGTGCTGGGTGTCTTCATCTGGGCCGTGCTGATGACGCACCTTGGTTCACGC CGTCCGCTGCTTTCAGGCGCACTCGCTGCGGCCGGTACCGCGATCGCTATCCTGCTAGTGCCGGTGCAATCGCAGGGCGG GCGCGAGTTGATGTTCGCTGGGTTGGCCCTGAACGGACTGGTGTCGAACGCTGTGCAGACGTCGATGTATTCACTGGCTG CGCACGTATATCCCACCGCTGTGCGCGCCTCTGGTGTCGCTTATGCGGCCGCCATCGGGCGCGTGGGAGGCATCTTCAGT TCCATCTTCGGCGCCGCGATCATCAGCGCGGGAGCGGGCGCTTACTGGGGAACGCTCGCCGCGTCGATGGCCTGCGCGTT CGCAGGCCTCGCCTGGGTGCGCAGTCACTACCCTGCGTTGGCAAAGGAGAATGCCGAGGCGGTGCGCCCGGATCAAGAGC GTTTATAA
Upstream 100 bases:
>100_bases GCGGCTTCGCCAGCACCGAAGAAGGCAACTCCCTCACCGAAGACGAGCAGTGGGCGAAGTTGGCGCGCATCGTCGAAGTG GCCGGGAAGGTGTGGGGAGC
Downstream 100 bases:
>100_bases GACTGCAGGCCCGGCTTGATGCTCTTCTCGTCAAGGAACTGCTTCATCCCCTCCGCGCGCGCATCTTCGGGATCGCGATG CAAAGCCTGATCGAGCTTCG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSAPVEIGSLLDRGRWTPYQRLLTALAALAVIFDGFDIQILGFAIPSLMKEWGVARPAFGPVLALGLAGMAAGSPFAGYW GDRWGRRPALIGCVALFGLATVATSSVHSVFALAVLRFVTGLGAGGAVPNATAFAAEFAPLRQRAVAVKLTIVCVPLGGM LGGLIAAQVLPALGWRALYQIGGALPLAFAAILWTVLPESPSFLAQRPQRWPALEQLLRRMSRAVPAGSSFEDQRESGSV RRAPIRELLGSRHLRDTVGLWLAFFFCLGAIYLVFGWLPAMLTSQGMDVAGASRGLALYNFGGVLGVFIWAVLMTHLGSR RPLLSGALAAAGTAIAILLVPVQSQGGRELMFAGLALNGLVSNAVQTSMYSLAAHVYPTAVRASGVAYAAAIGRVGGIFS SIFGAAIISAGAGAYWGTLAASMACAFAGLAWVRSHYPALAKENAEAVRPDQERL
Sequences:
>Translated_455_residues MSAPVEIGSLLDRGRWTPYQRLLTALAALAVIFDGFDIQILGFAIPSLMKEWGVARPAFGPVLALGLAGMAAGSPFAGYW GDRWGRRPALIGCVALFGLATVATSSVHSVFALAVLRFVTGLGAGGAVPNATAFAAEFAPLRQRAVAVKLTIVCVPLGGM LGGLIAAQVLPALGWRALYQIGGALPLAFAAILWTVLPESPSFLAQRPQRWPALEQLLRRMSRAVPAGSSFEDQRESGSV RRAPIRELLGSRHLRDTVGLWLAFFFCLGAIYLVFGWLPAMLTSQGMDVAGASRGLALYNFGGVLGVFIWAVLMTHLGSR RPLLSGALAAAGTAIAILLVPVQSQGGRELMFAGLALNGLVSNAVQTSMYSLAAHVYPTAVRASGVAYAAAIGRVGGIFS SIFGAAIISAGAGAYWGTLAASMACAFAGLAWVRSHYPALAKENAEAVRPDQERL >Mature_454_residues SAPVEIGSLLDRGRWTPYQRLLTALAALAVIFDGFDIQILGFAIPSLMKEWGVARPAFGPVLALGLAGMAAGSPFAGYWG DRWGRRPALIGCVALFGLATVATSSVHSVFALAVLRFVTGLGAGGAVPNATAFAAEFAPLRQRAVAVKLTIVCVPLGGML GGLIAAQVLPALGWRALYQIGGALPLAFAAILWTVLPESPSFLAQRPQRWPALEQLLRRMSRAVPAGSSFEDQRESGSVR RAPIRELLGSRHLRDTVGLWLAFFFCLGAIYLVFGWLPAMLTSQGMDVAGASRGLALYNFGGVLGVFIWAVLMTHLGSRR PLLSGALAAAGTAIAILLVPVQSQGGRELMFAGLALNGLVSNAVQTSMYSLAAHVYPTAVRASGVAYAAAIGRVGGIFSS IFGAAIISAGAGAYWGTLAASMACAFAGLAWVRSHYPALAKENAEAVRPDQERL
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=446, Percent_Identity=26.6816143497758, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI7662270, Length=231, Percent_Identity=25.1082251082251, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI213021148, Length=410, Percent_Identity=23.6585365853659, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87081723, Length=405, Percent_Identity=29.8765432098765, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1786229, Length=375, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87082404, Length=393, Percent_Identity=23.1552162849873, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082231, Length=423, Percent_Identity=22.9314420803783, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI87082159, Length=410, Percent_Identity=25.609756097561, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788068, Length=340, Percent_Identity=23.8235294117647, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788074, Length=349, Percent_Identity=24.9283667621776, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789207, Length=234, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI32564663, Length=411, Percent_Identity=26.5206812652068, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19922874, Length=433, Percent_Identity=26.7898383371824, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47590; Mature: 47459
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVEIGSLLDRGRWTPYQRLLTALAALAVIFDGFDIQILGFAIPSLMKEWGVARPAFG CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH PVLALGLAGMAAGSPFAGYWGDRWGRRPALIGCVALFGLATVATSSVHSVFALAVLRFVT HHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAGGAVPNATAFAAEFAPLRQRAVAVKLTIVCVPLGGMLGGLIAAQVLPALGWRALYQ CCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH IGGALPLAFAAILWTVLPESPSFLAQRPQRWPALEQLLRRMSRAVPAGSSFEDQRESGSV HCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RRAPIRELLGSRHLRDTVGLWLAFFFCLGAIYLVFGWLPAMLTSQGMDVAGASRGLALYN CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHH FGGVLGVFIWAVLMTHLGSRRPLLSGALAAAGTAIAILLVPVQSQGGRELMFAGLALNGL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHH VSNAVQTSMYSLAAHVYPTAVRASGVAYAAAIGRVGGIFSSIFGAAIISAGAGAYWGTLA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ASMACAFAGLAWVRSHYPALAKENAEAVRPDQERL HHHHHHHHHHHHHHHHCCHHHHCCCHHCCCCCCCC >Mature Secondary Structure SAPVEIGSLLDRGRWTPYQRLLTALAALAVIFDGFDIQILGFAIPSLMKEWGVARPAFG CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH PVLALGLAGMAAGSPFAGYWGDRWGRRPALIGCVALFGLATVATSSVHSVFALAVLRFVT HHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAGGAVPNATAFAAEFAPLRQRAVAVKLTIVCVPLGGMLGGLIAAQVLPALGWRALYQ CCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH IGGALPLAFAAILWTVLPESPSFLAQRPQRWPALEQLLRRMSRAVPAGSSFEDQRESGSV HCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RRAPIRELLGSRHLRDTVGLWLAFFFCLGAIYLVFGWLPAMLTSQGMDVAGASRGLALYN CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHH FGGVLGVFIWAVLMTHLGSRRPLLSGALAAAGTAIAILLVPVQSQGGRELMFAGLALNGL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHH VSNAVQTSMYSLAAHVYPTAVRASGVAYAAAIGRVGGIFSSIFGAAIISAGAGAYWGTLA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ASMACAFAGLAWVRSHYPALAKENAEAVRPDQERL HHHHHHHHHHHHHHHHCCHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]