| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619271
Identifier: 116619271
GI number: 116619271
Start: 168866
End: 169819
Strand: Direct
Name: 116619271
Synonym: Acid_0127
Alternate gene names: NA
Gene position: 168866-169819 (Clockwise)
Preceding gene: 116619270
Following gene: 116619272
Centisome position: 1.69
GC content: 61.43
Gene sequence:
>954_bases ATGGCGCTGATCGCGGTTTCGGGTCATCCGGGGTGCCGGTTCGAAGAGGTCGCGCGCTTCAGCGCGCAGCGCCTCGGCTA TGAGTTGCTGACCCAGTCCCGCATCCACTTACTAAGTGGCGAGGAATTCGGCGAAGCCGTCGTCATTCCCGATAAGGCTT GGCCCAGCCTCGTCACGTCCATCCTGGCGCGTCTCGCCACGGAGCACCACATCGTCTATTGCGCGATGGGCGGCGAGCTC CAGGCCAAGCACTTCCCAGGGACTCTCCGCGTCCACGTCGTCGCTCCTGAAAACGTGCGCATCGGCAACCTGATGCTCGA TCACCGGCTGGAACGCCCCGCCGCGCGCCAGATGCTTCTCGATCTCGAAGCCGCCGACCGCGCCGACCGCAAGGCCAAAT TCGGCAAGACCCGCGCTACCGCGGATCTCTTCGATATCGTGCTCAACAGCGAAGTTCTCACCACCGAACAGATGGCGGAT TTCGTGGCCACTGCGGTCTCTGCCGCCGGCCTCGCCGAGCGCGGCTTCCTCTCTCCCGCCGCCGAGCAGCAACTCCAGTT CCAGATGCGCCTCAAGCTCTCCCGCTTCGGCATTGTCCCGCCCGGCAACGTCACCCTGCGTAAGAAAATGTTCGCTCACG CGAGCGAGGAAATGTTTGCGAACCTCCTCGATTTTTACCGCATCGCGTGGGAGTATGAGCCGCGCAGTTTTCCCGTACAA TACGGACCCGATGGCGCCGTGCTCGAATCCTTCACGCCCGATTTCTATTTGCCCGAGTTCGATCTGTACGTGGAGCTGAC CACCATGAAGCAATCCCTCGTCACCCGCAAGAATCGCAAGGTGCGTCTGCTCCGCCAGCTTTATCCGCACCTAAACATCC AGGTCTTCTACCAGAAGGATTTCGAGAACCTGATCTTTAAGTACGGGCTTGCCGAGCGGCCGGTGCAGGCATGA
Upstream 100 bases:
>100_bases AGTGGAAACCCAGCGCATTCTCGCCGAAATTCTCCACCCCGAAGGGTTTGAGCCAACCCTGCGCGGAGCCGGGTGGCGCG CGTTATGATGAGCTTGTGAC
Downstream 100 bases:
>100_bases GCGCGCTCCCCATCCCAGGCCTCGACCGCATCCTGTTCACTGAAGAACAGATCAAGGCCCGCATTCGTGAGGTCGCCGCC GAAATTACCGCGCGCTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MALIAVSGHPGCRFEEVARFSAQRLGYELLTQSRIHLLSGEEFGEAVVIPDKAWPSLVTSILARLATEHHIVYCAMGGEL QAKHFPGTLRVHVVAPENVRIGNLMLDHRLERPAARQMLLDLEAADRADRKAKFGKTRATADLFDIVLNSEVLTTEQMAD FVATAVSAAGLAERGFLSPAAEQQLQFQMRLKLSRFGIVPPGNVTLRKKMFAHASEEMFANLLDFYRIAWEYEPRSFPVQ YGPDGAVLESFTPDFYLPEFDLYVELTTMKQSLVTRKNRKVRLLRQLYPHLNIQVFYQKDFENLIFKYGLAERPVQA
Sequences:
>Translated_317_residues MALIAVSGHPGCRFEEVARFSAQRLGYELLTQSRIHLLSGEEFGEAVVIPDKAWPSLVTSILARLATEHHIVYCAMGGEL QAKHFPGTLRVHVVAPENVRIGNLMLDHRLERPAARQMLLDLEAADRADRKAKFGKTRATADLFDIVLNSEVLTTEQMAD FVATAVSAAGLAERGFLSPAAEQQLQFQMRLKLSRFGIVPPGNVTLRKKMFAHASEEMFANLLDFYRIAWEYEPRSFPVQ YGPDGAVLESFTPDFYLPEFDLYVELTTMKQSLVTRKNRKVRLLRQLYPHLNIQVFYQKDFENLIFKYGLAERPVQA >Mature_316_residues ALIAVSGHPGCRFEEVARFSAQRLGYELLTQSRIHLLSGEEFGEAVVIPDKAWPSLVTSILARLATEHHIVYCAMGGELQ AKHFPGTLRVHVVAPENVRIGNLMLDHRLERPAARQMLLDLEAADRADRKAKFGKTRATADLFDIVLNSEVLTTEQMADF VATAVSAAGLAERGFLSPAAEQQLQFQMRLKLSRFGIVPPGNVTLRKKMFAHASEEMFANLLDFYRIAWEYEPRSFPVQY GPDGAVLESFTPDFYLPEFDLYVELTTMKQSLVTRKNRKVRLLRQLYPHLNIQVFYQKDFENLIFKYGLAERPVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35945; Mature: 35814
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIAVSGHPGCRFEEVARFSAQRLGYELLTQSRIHLLSGEEFGEAVVIPDKAWPSLVTS CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCHHHHHHH ILARLATEHHIVYCAMGGELQAKHFPGTLRVHVVAPENVRIGNLMLDHRLERPAARQMLL HHHHHCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCEEECHHHHHHHHCCHHHHHHHH DLEAADRADRKAKFGKTRATADLFDIVLNSEVLTTEQMADFVATAVSAAGLAERGFLSPA HHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCHH AEQQLQFQMRLKLSRFGIVPPGNVTLRKKMFAHASEEMFANLLDFYRIAWEYEPRSFPVQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE YGPDGAVLESFTPDFYLPEFDLYVELTTMKQSLVTRKNRKVRLLRQLYPHLNIQVFYQKD ECCCCCCHHCCCCCCCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECC FENLIFKYGLAERPVQA HHHHHHHHCCCCCCCCC >Mature Secondary Structure ALIAVSGHPGCRFEEVARFSAQRLGYELLTQSRIHLLSGEEFGEAVVIPDKAWPSLVTS EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCHHHHHHH ILARLATEHHIVYCAMGGELQAKHFPGTLRVHVVAPENVRIGNLMLDHRLERPAARQMLL HHHHHCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCEEECHHHHHHHHCCHHHHHHHH DLEAADRADRKAKFGKTRATADLFDIVLNSEVLTTEQMADFVATAVSAAGLAERGFLSPA HHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCHH AEQQLQFQMRLKLSRFGIVPPGNVTLRKKMFAHASEEMFANLLDFYRIAWEYEPRSFPVQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE YGPDGAVLESFTPDFYLPEFDLYVELTTMKQSLVTRKNRKVRLLRQLYPHLNIQVFYQKD ECCCCCCHHCCCCCCCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECC FENLIFKYGLAERPVQA HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA