| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619235
Identifier: 116619235
GI number: 116619235
Start: 124015
End: 125736
Strand: Direct
Name: 116619235
Synonym: Acid_0090
Alternate gene names: NA
Gene position: 124015-125736 (Clockwise)
Preceding gene: 116619229
Following gene: 116619236
Centisome position: 1.24
GC content: 62.14
Gene sequence:
>1722_bases ATGACCGCTCGGATTCTCACCGCTGTTTGCTTCTCGCTTGCCCTCACCGGGGCAATTGCGCAAACCCCTTCTCCCGCGCC ACCCGACGCTGACAAGCCAACCGCCCGTGAGACTCCGCCCGATCAAAAGGCCTACGCGGATGTGATGAAGATTACCGACC CTGGCAAGAAGATAGAGGCCTTGGAGAAGTTCCGCAAAGACTTCCCCGACAGCATGTTCGCCTCCGGGGTGGATTCCACG ATTCTTTCCACGCTGATCCAGAAGATGCCGGATCAGAAGCCGCGCATCAAGAAGACTGCGCAGGCCATGTACGCAGCCGC CGTCGCCAAAGACAAGGCGGCCTCCAAGAACAACATCGTGGTCACGACGGCCGCGCGCGGCATCGCTGCGAATCGAATTG CCGACCAGTTGCTGAGTGGCGACATGCTGCTCAAGGGTGCCGAGAGCTACGCAAAAAAGGGCGTCGATTCCATGCAGCAG AGTATCTGGATCGCCGAACAACGTGAGGCGTTCGCGAACCGTAAGCAGCCCATCCCGGCGCAGGAAGAGCTCGTCAAGCG TTTCCAGCAGGCGCGCGCCGTGCGCATCGCGACCCTGGGGCTGGTGGAGCGCAAACTCGGCCGCACGGCCCAGGCGCAGA AGCTTCTCTTGGAAGCCTACGCGGTCAACCCGGCGAGCGCGCCGGTGGCCGGGGCGTTGGGCGAAATGGCGGCCAAGGCG GGTGAAGATTCCAAAGCCATGGATTACCTGATCTCCGCGCGCCTCACCGGCAATGCGACCGCCGCGGCCAATGAGGGCTT CGAAACCCTCTACAAGAAGACGCACAACGGCAACACCGATGGCCTGGAGGCGATGCTGGATTCCGAGTATCACAAGCGCT TTCCGAACCCCGTCCACGTGGAGGCCTACAAGCCGACCGCCGCGCGCACCGATCGTGTCGTGCTCGCCGAAGTCTTCACC GGTTCCGGCTGTCCGCCCTGCGCCGGCGCGGATATCGCCTTCGACGCCGCCATGGAGCGCTATGCCCGCAAGGATCTCGC CGTGGTGATGTACCACGTCCACATTCCGCGCCCGGACCCGATGACCAACCCGGATACCCTGGCTCGAGCCAAGAGTTACT CGGTCACCGGCGTGCCCAGCTTCGCCATCGACGGCAAGAAGACCGTCGGCGGCGGCTCGCGCGATATGGCCCCCGGAGTC TTCGATCGCTTCAGGAAAGATCTGGAGAAGGATCTCGACACCGCGGCCGAAGCCAAGATCAAAGTGGATGCCGGCCTCAC TGGCGGCAGCGTAAAAGTCTCCGCTGCCGTGGACGGCGTGGAGAGCGATTCCAAAGAGCTCAAGGTACAGATTCTCCTGG TGGAAAAAGAGATCCGTCACCTTGGCGAGAATGGAGTCCGCTTCCATCCCATGGTGGTTCGCGCCATCGGCGGCGAAAAG GCCGGCGGCTACACACTCGAGCCTAGGGGCAAAGGGACCTTCGAAGCCACCTTCGATTTGGACGCCGTGAGCAAGGCCCT GAAGGCGCACCTCGACGATTTCGAAAGCAAGCGCGAAGGCTTTAAGTTCTCCGCCAAGCGGGATCAGATCAACCGCGCCG ATCTTGCCGTGGTGGTCTTCGTACAGGACGACAAAACCAAGCACGTGCTGCAGAGCGCCTACATCGATCTGGGCACCGGT CCCGGCTCGCGCCCCACTACGGAAGCCAATAATCTCAAATGA
Upstream 100 bases:
>100_bases TATATCGCCACACGGAGAGTTCCCGCCCTCATGCTCTGATTTCAGTAGAATAAAAACACTCGGATTACCCGGTAGTACAT CCGTCGCGAAGGAGTATCGC
Downstream 100 bases:
>100_bases AAAAGATCGCCTTCGCGGCCATCCTCACCGCCGCCCTCATGGCAGCGCCTTCCGACCCGGTCGCCTGGAAGCTGCAAACC GCCTCCGCCGCGCCGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTARILTAVCFSLALTGAIAQTPSPAPPDADKPTARETPPDQKAYADVMKITDPGKKIEALEKFRKDFPDSMFASGVDST ILSTLIQKMPDQKPRIKKTAQAMYAAAVAKDKAASKNNIVVTTAARGIAANRIADQLLSGDMLLKGAESYAKKGVDSMQQ SIWIAEQREAFANRKQPIPAQEELVKRFQQARAVRIATLGLVERKLGRTAQAQKLLLEAYAVNPASAPVAGALGEMAAKA GEDSKAMDYLISARLTGNATAAANEGFETLYKKTHNGNTDGLEAMLDSEYHKRFPNPVHVEAYKPTAARTDRVVLAEVFT GSGCPPCAGADIAFDAAMERYARKDLAVVMYHVHIPRPDPMTNPDTLARAKSYSVTGVPSFAIDGKKTVGGGSRDMAPGV FDRFRKDLEKDLDTAAEAKIKVDAGLTGGSVKVSAAVDGVESDSKELKVQILLVEKEIRHLGENGVRFHPMVVRAIGGEK AGGYTLEPRGKGTFEATFDLDAVSKALKAHLDDFESKREGFKFSAKRDQINRADLAVVVFVQDDKTKHVLQSAYIDLGTG PGSRPTTEANNLK
Sequences:
>Translated_573_residues MTARILTAVCFSLALTGAIAQTPSPAPPDADKPTARETPPDQKAYADVMKITDPGKKIEALEKFRKDFPDSMFASGVDST ILSTLIQKMPDQKPRIKKTAQAMYAAAVAKDKAASKNNIVVTTAARGIAANRIADQLLSGDMLLKGAESYAKKGVDSMQQ SIWIAEQREAFANRKQPIPAQEELVKRFQQARAVRIATLGLVERKLGRTAQAQKLLLEAYAVNPASAPVAGALGEMAAKA GEDSKAMDYLISARLTGNATAAANEGFETLYKKTHNGNTDGLEAMLDSEYHKRFPNPVHVEAYKPTAARTDRVVLAEVFT GSGCPPCAGADIAFDAAMERYARKDLAVVMYHVHIPRPDPMTNPDTLARAKSYSVTGVPSFAIDGKKTVGGGSRDMAPGV FDRFRKDLEKDLDTAAEAKIKVDAGLTGGSVKVSAAVDGVESDSKELKVQILLVEKEIRHLGENGVRFHPMVVRAIGGEK AGGYTLEPRGKGTFEATFDLDAVSKALKAHLDDFESKREGFKFSAKRDQINRADLAVVVFVQDDKTKHVLQSAYIDLGTG PGSRPTTEANNLK >Mature_572_residues TARILTAVCFSLALTGAIAQTPSPAPPDADKPTARETPPDQKAYADVMKITDPGKKIEALEKFRKDFPDSMFASGVDSTI LSTLIQKMPDQKPRIKKTAQAMYAAAVAKDKAASKNNIVVTTAARGIAANRIADQLLSGDMLLKGAESYAKKGVDSMQQS IWIAEQREAFANRKQPIPAQEELVKRFQQARAVRIATLGLVERKLGRTAQAQKLLLEAYAVNPASAPVAGALGEMAAKAG EDSKAMDYLISARLTGNATAAANEGFETLYKKTHNGNTDGLEAMLDSEYHKRFPNPVHVEAYKPTAARTDRVVLAEVFTG SGCPPCAGADIAFDAAMERYARKDLAVVMYHVHIPRPDPMTNPDTLARAKSYSVTGVPSFAIDGKKTVGGGSRDMAPGVF DRFRKDLEKDLDTAAEAKIKVDAGLTGGSVKVSAAVDGVESDSKELKVQILLVEKEIRHLGENGVRFHPMVVRAIGGEKA GGYTLEPRGKGTFEATFDLDAVSKALKAHLDDFESKREGFKFSAKRDQINRADLAVVVFVQDDKTKHVLQSAYIDLGTGP GSRPTTEANNLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61664; Mature: 61533
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARILTAVCFSLALTGAIAQTPSPAPPDADKPTARETPPDQKAYADVMKITDPGKKIEA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH LEKFRKDFPDSMFASGVDSTILSTLIQKMPDQKPRIKKTAQAMYAAAVAKDKAASKNNIV HHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE VTTAARGIAANRIADQLLSGDMLLKGAESYAKKGVDSMQQSIWIAEQREAFANRKQPIPA EEECCCCHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH QEELVKRFQQARAVRIATLGLVERKLGRTAQAQKLLLEAYAVNPASAPVAGALGEMAAKA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC GEDSKAMDYLISARLTGNATAAANEGFETLYKKTHNGNTDGLEAMLDSEYHKRFPNPVHV CCCHHHHHHHHHHEECCCCCHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCEEE EAYKPTAARTDRVVLAEVFTGSGCPPCAGADIAFDAAMERYARKDLAVVMYHVHIPRPDP EEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCC MTNPDTLARAKSYSVTGVPSFAIDGKKTVGGGSRDMAPGVFDRFRKDLEKDLDTAAEAKI CCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEE KVDAGLTGGSVKVSAAVDGVESDSKELKVQILLVEKEIRHLGENGVRFHPMVVRAIGGEK EEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEHHHHHCCCCCCEECCEEEEEECCCC AGGYTLEPRGKGTFEATFDLDAVSKALKAHLDDFESKREGFKFSAKRDQINRADLAVVVF CCCEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCCCCCEEEEEE VQDDKTKHVLQSAYIDLGTGPGSRPTTEANNLK EECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TARILTAVCFSLALTGAIAQTPSPAPPDADKPTARETPPDQKAYADVMKITDPGKKIEA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH LEKFRKDFPDSMFASGVDSTILSTLIQKMPDQKPRIKKTAQAMYAAAVAKDKAASKNNIV HHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE VTTAARGIAANRIADQLLSGDMLLKGAESYAKKGVDSMQQSIWIAEQREAFANRKQPIPA EEECCCCHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH QEELVKRFQQARAVRIATLGLVERKLGRTAQAQKLLLEAYAVNPASAPVAGALGEMAAKA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC GEDSKAMDYLISARLTGNATAAANEGFETLYKKTHNGNTDGLEAMLDSEYHKRFPNPVHV CCCHHHHHHHHHHEECCCCCHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCEEE EAYKPTAARTDRVVLAEVFTGSGCPPCAGADIAFDAAMERYARKDLAVVMYHVHIPRPDP EEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCC MTNPDTLARAKSYSVTGVPSFAIDGKKTVGGGSRDMAPGVFDRFRKDLEKDLDTAAEAKI CCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEE KVDAGLTGGSVKVSAAVDGVESDSKELKVQILLVEKEIRHLGENGVRFHPMVVRAIGGEK EEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEHHHHHCCCCCCEECCEEEEEECCCC AGGYTLEPRGKGTFEATFDLDAVSKALKAHLDDFESKREGFKFSAKRDQINRADLAVVVF CCCEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCCCCCEEEEEE VQDDKTKHVLQSAYIDLGTGPGSRPTTEANNLK EECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA