| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619193
Identifier: 116619193
GI number: 116619193
Start: 74735
End: 75397
Strand: Direct
Name: 116619193
Synonym: Acid_0048
Alternate gene names: NA
Gene position: 74735-75397 (Clockwise)
Preceding gene: 116619192
Following gene: 116619194
Centisome position: 0.75
GC content: 60.94
Gene sequence:
>663_bases ATGCCCAGAAACTTTAGCCTGAATGTCGCGGGCTTGAAATGGAAAGATCCGCGCGTCGCCATGCGCGCGGTGCTGGGCGT TCTGCTGCTGGCGAACCTGGTTGCGGCGGTGATCGCGTTCAAACCGTTCGGTGGCAGCGCGGATGACCTGCGGCGCGAGC GCAATAGCCTGCAGCAGCAGCTGGCACAGCTGCAGAAGAGCGTCGCCGATACTAAAAGGCAGGTGGAGAAGGTGCAGATC GCGCGCACCCAGGGCGACCAGTTTCTAGCTAAATATTTCACCGACCGCCGCGTGGTGACTTCCACGATTCAGGGCGAATT GGAAGACATCGCGAAACAGGCCGGGATCAAATTCCAGCCGACCACGTGGACCGATGAGCCTATCGAGGGCAGCGACACGA TGGTCATGAAGACGATCAACGCCGGCTGCCAGGGGACGTACGCGTCGCTTTCCAAGTTTGTAAACCTGGTGGACCGCTCG CCGCGCTTCCTGATTATCGAGAGCATGGTGGCCGCGCCGCAGCAGACGGGACAGACGTTGAACGTGACCATCAAGATCGA TACCTTCATCAAGGACTCGGCCGGCAGCGGGGAAGCAGAAGCCGGACCTGCGGCGCCGGTTGCAATGCCTACGGCCGAAC CCGGTTCCGGGGGTGGATTATGA
Upstream 100 bases:
>100_bases AACCTGGAGGGTTCGCCGCTGTTCGGCGGCGTGAGCCAGACCCTCTACAACCCTCCTTCCCAGGCGGAGCCGCTCTACCG GTACCGCTTCACGGTGAACT
Downstream 100 bases:
>100_bases AACTGGGTGCTGAGGATAAGAAGAAAGTCTACGCGCTGGGCGTACTCGGGGTGATCATGGTGGTCGCGGTTTACTCCAGC TTCTTTTCGGACTCCTCGTC
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPRNFSLNVAGLKWKDPRVAMRAVLGVLLLANLVAAVIAFKPFGGSADDLRRERNSLQQQLAQLQKSVADTKRQVEKVQI ARTQGDQFLAKYFTDRRVVTSTIQGELEDIAKQAGIKFQPTTWTDEPIEGSDTMVMKTINAGCQGTYASLSKFVNLVDRS PRFLIIESMVAAPQQTGQTLNVTIKIDTFIKDSAGSGEAEAGPAAPVAMPTAEPGSGGGL
Sequences:
>Translated_220_residues MPRNFSLNVAGLKWKDPRVAMRAVLGVLLLANLVAAVIAFKPFGGSADDLRRERNSLQQQLAQLQKSVADTKRQVEKVQI ARTQGDQFLAKYFTDRRVVTSTIQGELEDIAKQAGIKFQPTTWTDEPIEGSDTMVMKTINAGCQGTYASLSKFVNLVDRS PRFLIIESMVAAPQQTGQTLNVTIKIDTFIKDSAGSGEAEAGPAAPVAMPTAEPGSGGGL >Mature_219_residues PRNFSLNVAGLKWKDPRVAMRAVLGVLLLANLVAAVIAFKPFGGSADDLRRERNSLQQQLAQLQKSVADTKRQVEKVQIA RTQGDQFLAKYFTDRRVVTSTIQGELEDIAKQAGIKFQPTTWTDEPIEGSDTMVMKTINAGCQGTYASLSKFVNLVDRSP RFLIIESMVAAPQQTGQTLNVTIKIDTFIKDSAGSGEAEAGPAAPVAMPTAEPGSGGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23695; Mature: 23564
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNFSLNVAGLKWKDPRVAMRAVLGVLLLANLVAAVIAFKPFGGSADDLRRERNSLQQQ CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LAQLQKSVADTKRQVEKVQIARTQGDQFLAKYFTDRRVVTSTIQGELEDIAKQAGIKFQP HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECC TTWTDEPIEGSDTMVMKTINAGCQGTYASLSKFVNLVDRSPRFLIIESMVAAPQQTGQTL CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCHHHCCCEE NVTIKIDTFIKDSAGSGEAEAGPAAPVAMPTAEPGSGGGL EEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure PRNFSLNVAGLKWKDPRVAMRAVLGVLLLANLVAAVIAFKPFGGSADDLRRERNSLQQQ CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LAQLQKSVADTKRQVEKVQIARTQGDQFLAKYFTDRRVVTSTIQGELEDIAKQAGIKFQP HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECC TTWTDEPIEGSDTMVMKTINAGCQGTYASLSKFVNLVDRSPRFLIIESMVAAPQQTGQTL CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCHHHCCCEE NVTIKIDTFIKDSAGSGEAEAGPAAPVAMPTAEPGSGGGL EEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA