| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yhhX [C]
Identifier: 116619168
GI number: 116619168
Start: 33776
End: 35110
Strand: Direct
Name: yhhX [C]
Synonym: Acid_0023
Alternate gene names: 116619168
Gene position: 33776-35110 (Clockwise)
Preceding gene: 116619166
Following gene: 116619169
Centisome position: 0.34
GC content: 62.55
Gene sequence:
>1335_bases ATGATTCCGAGCATCATGACGGAAAAGCTTTCGCGTAGGCATTTGTTGGGCGGAGCGGCCGCGGCATTCACGATCGTCAA GCCGCACCTGGTTCGGGGCGCGGGGAAGGAGACGCTGCGCGCTGGGCTGGTCGGGTGCGGCGGACGCGGGACACAGGCGA CGGTGGACATGCTCACGGGCAATGAGAATGTCGAACTGGTCGCGATGGCGGATATTTTCGAGGACCACCTGGAAGGCGCG TTGAAGAATCTGCGAGACCCGAAGTACGTGGCGCGGCACGCGGGGATCACGGTGGAGCGCGACGGCAAACCAAAGGAGAT GTCGGCGCAGGATTTGGTGAGCTCGATTCAACCACGGATCAAGGTTGCGCCGGACCGTCACTTCGTGGGATTCGACGCCT ACCGGAAGCTGGCAAACAGCGACCTGGACATCGTGATGCTGGCGACGCCTCCGGGGTACCGGCCGATTCATTTCGAGGCG GCGATCGAAGCCGGGAAGCACGTGTTCACGGAGAAGCCGATCGCGACCGATGCTACGGGGGCGCGGCGGTTTCTGGCGGC GGGGCGCAAAGCGGCGGAGAAAAAGCTGACGGTGATGAGCGGCGCGCAGCGGCGCGAGGATCGTCCTTACGTGGAGACGG TGCGCAAGATCCACGCGGGCGAACTGGGAGAGATCGTGGCGCTGCAGGCGAATTACCTGAGCGGACCGGTGATGCACGCG CAGGGGCGCGACGCGAAATGGGGCGATATGGAGTGGGAGCACCGCAACTGGTATTCCTTCCTCTGGCTATGCGGCGACCA GATTGTGGAGCAGCACTTCCACAACATCGATTTCATGAACTGGGTGATGGGAGGGCATCCTGCGAGCGTGGTGGCGAGCG GCGGCGCGGCATGGCGTCCAAGGGCGGCGCTGTATGGGAACATCTACGACCACATGAGCTCGGATTTCGTGTATCCGAAT GGCGTGCACCTGACCAGCTACTGCCGGCAATTTCCGAACGGGACCTATCGCAACGTGAGCGATATGGTGGTGGGGACCAA GGGACGCAGCACGGGGACGGACCTGGGGGAGAAGGGCATCAGCGCGTACGTGCAGGAGCACATCGAGATGGTGAACAGTA TCCAGGGGAGTGGACCGTACGTGAACCAGACGGTGCCGATCGCGGAGAGCACGCTGACGTGCATCATGGCGCGGGAATCG GCGTACTCGGGGCAGGCGATCACGTGGGAGCAGATCATGAATTCCAAGCAGGACCTGATGCCGCGCGGATTCGGGTACGA GATGTCCACCAAGCCGACGCCGCTTCCGGTGCCGGGAGAATATAAGTTTGTTTAA
Upstream 100 bases:
>100_bases CCTTTCCGCGGACTGGAGGCGCCCCTAGCGCTCAACTTCCTTATATCACGATCCACCTGGATGCAGGGAGGTGGGATTGT AACGGGGAGTGCGAAGGGAT
Downstream 100 bases:
>100_bases GATCGCGGCCGTTAACGGAGAAGCCGCCTGAAAGGCGGCTGCAGCCAGGATTGGCTGCCCCACAGTGCGGTGAGCCGCAA ACTGAATGATCCGCGTCGTG
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Dehydrogenase; Oxidoreductase; Hydrogenase; Streptomycin Biosynthesis Protein StrI
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MIPSIMTEKLSRRHLLGGAAAAFTIVKPHLVRGAGKETLRAGLVGCGGRGTQATVDMLTGNENVELVAMADIFEDHLEGA LKNLRDPKYVARHAGITVERDGKPKEMSAQDLVSSIQPRIKVAPDRHFVGFDAYRKLANSDLDIVMLATPPGYRPIHFEA AIEAGKHVFTEKPIATDATGARRFLAAGRKAAEKKLTVMSGAQRREDRPYVETVRKIHAGELGEIVALQANYLSGPVMHA QGRDAKWGDMEWEHRNWYSFLWLCGDQIVEQHFHNIDFMNWVMGGHPASVVASGGAAWRPRAALYGNIYDHMSSDFVYPN GVHLTSYCRQFPNGTYRNVSDMVVGTKGRSTGTDLGEKGISAYVQEHIEMVNSIQGSGPYVNQTVPIAESTLTCIMARES AYSGQAITWEQIMNSKQDLMPRGFGYEMSTKPTPLPVPGEYKFV
Sequences:
>Translated_444_residues MIPSIMTEKLSRRHLLGGAAAAFTIVKPHLVRGAGKETLRAGLVGCGGRGTQATVDMLTGNENVELVAMADIFEDHLEGA LKNLRDPKYVARHAGITVERDGKPKEMSAQDLVSSIQPRIKVAPDRHFVGFDAYRKLANSDLDIVMLATPPGYRPIHFEA AIEAGKHVFTEKPIATDATGARRFLAAGRKAAEKKLTVMSGAQRREDRPYVETVRKIHAGELGEIVALQANYLSGPVMHA QGRDAKWGDMEWEHRNWYSFLWLCGDQIVEQHFHNIDFMNWVMGGHPASVVASGGAAWRPRAALYGNIYDHMSSDFVYPN GVHLTSYCRQFPNGTYRNVSDMVVGTKGRSTGTDLGEKGISAYVQEHIEMVNSIQGSGPYVNQTVPIAESTLTCIMARES AYSGQAITWEQIMNSKQDLMPRGFGYEMSTKPTPLPVPGEYKFV >Mature_444_residues MIPSIMTEKLSRRHLLGGAAAAFTIVKPHLVRGAGKETLRAGLVGCGGRGTQATVDMLTGNENVELVAMADIFEDHLEGA LKNLRDPKYVARHAGITVERDGKPKEMSAQDLVSSIQPRIKVAPDRHFVGFDAYRKLANSDLDIVMLATPPGYRPIHFEA AIEAGKHVFTEKPIATDATGARRFLAAGRKAAEKKLTVMSGAQRREDRPYVETVRKIHAGELGEIVALQANYLSGPVMHA QGRDAKWGDMEWEHRNWYSFLWLCGDQIVEQHFHNIDFMNWVMGGHPASVVASGGAAWRPRAALYGNIYDHMSSDFVYPN GVHLTSYCRQFPNGTYRNVSDMVVGTKGRSTGTDLGEKGISAYVQEHIEMVNSIQGSGPYVNQTVPIAESTLTCIMARES AYSGQAITWEQIMNSKQDLMPRGFGYEMSTKPTPLPVPGEYKFV
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 48936; Mature: 48936
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS01286 FA58C_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSIMTEKLSRRHLLGGAAAAFTIVKPHLVRGAGKETLRAGLVGCGGRGTQATVDMLTG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEEC NENVELVAMADIFEDHLEGALKNLRDPKYVARHAGITVERDGKPKEMSAQDLVSSIQPRI CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCE KVAPDRHFVGFDAYRKLANSDLDIVMLATPPGYRPIHFEAAIEAGKHVFTEKPIATDATG EECCCCEEECHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHCCCHHHCCCCCCCCCHH ARRFLAAGRKAAEKKLTVMSGAQRREDRPYVETVRKIHAGELGEIVALQANYLSGPVMHA HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCEEEC QGRDAKWGDMEWEHRNWYSFLWLCGDQIVEQHFHNIDFMNWVMGGHPASVVASGGAAWRP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHEECCCCCCCC RAALYGNIYDHMSSDFVYPNGVHLTSYCRQFPNGTYRNVSDMVVGTKGRSTGTDLGEKGI CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCHHHHHH SAYVQEHIEMVNSIQGSGPYVNQTVPIAESTLTCIMARESAYSGQAITWEQIMNSKQDLM HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCEEEHHHHHCCHHHCC PRGFGYEMSTKPTPLPVPGEYKFV CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPSIMTEKLSRRHLLGGAAAAFTIVKPHLVRGAGKETLRAGLVGCGGRGTQATVDMLTG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEEC NENVELVAMADIFEDHLEGALKNLRDPKYVARHAGITVERDGKPKEMSAQDLVSSIQPRI CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCE KVAPDRHFVGFDAYRKLANSDLDIVMLATPPGYRPIHFEAAIEAGKHVFTEKPIATDATG EECCCCEEECHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHCCCHHHCCCCCCCCCHH ARRFLAAGRKAAEKKLTVMSGAQRREDRPYVETVRKIHAGELGEIVALQANYLSGPVMHA HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCEEEC QGRDAKWGDMEWEHRNWYSFLWLCGDQIVEQHFHNIDFMNWVMGGHPASVVASGGAAWRP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHEECCCCCCCC RAALYGNIYDHMSSDFVYPNGVHLTSYCRQFPNGTYRNVSDMVVGTKGRSTGTDLGEKGI CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCHHHHHH SAYVQEHIEMVNSIQGSGPYVNQTVPIAESTLTCIMARESAYSGQAITWEQIMNSKQDLM HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCEEEHHHHHCCHHHCC PRGFGYEMSTKPTPLPVPGEYKFV CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA