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The map label for this gene is 116517201

Identifier: 116517201

GI number: 116517201

Start: 1931126

End: 1932133

Strand: Direct

Name: 116517201

Synonym: SPD_1962

Alternate gene names: NA

Gene position: 1931126-1932133 (Clockwise)

Preceding gene: 116516770

Following gene: 116516063

Centisome position: 94.38

GC content: 41.07

Gene sequence:

>1008_bases
ATGACTGAAAAACTAATCAATTCAAAACCAAATGGTGTATTCGCATTGATTCTCATTGAGTTGACAATCGTACTTGGTAT
CTTTATATTTATAATGGGGGTTGGTTCGGAAAACATTTTTGGAATTATTATCGGACCTTTACTAATCGTAATTGCAGGTC
TAGCTCATGCTGGTTTAAAAGTTGTCAAACCTCAGGAAGCTCTGGTTCTGACACTCTTTGGTAATTATACAGGTACCATC
AAAGAACCTGGTTTTTACTTTGTCAATCCCTTCAGCGTAGCAGTCAACCCTGCAAACCACACTCGACTTGGACAAAGTGG
TGATGTTAGCACAAAATCTCCTTTTTTAGGAGCTAAATCATCAAATGACAATGATGTAAATCTTGAAATTGGCAAGAAAC
ACATTTCCCTCAAAGTCATGACCTTGAGCAATTCTCGTCAAAAAATCAATGATTGCTTAGGAAACCCTGTAGAAATCGGT
ATCGCGGTAACTTGGAGAGTTGTCGATACCGCTAAGGCAGTCTTCAACGTTGATAACTACAAAGAATATCTTTCACTGCA
ATGTGATAGCGCCCTCCGTAATATTGTCCGCATCTATCCTTACGATGTGTCTCCTAATGTGGATACTACGGGTGACGGGC
AAGCAGATGAAGGTAGTCTCCGTGGCTCTAGCGAAATTGTTGCTAACCGTATTCGTGAAGAAATCCAAAGTCGTGTTGAG
GATGCTGGCTTGGAAATCCTTGAAGCACGTATCACTTACCTAGCTTATGCTCCAGAAATTGCTGCCGTTATGCTTCAACG
CCAACAAGCATCTGCCATTATTGATGCACGTAAGATGATTGTAGATGGTGCTGTAGGAATGGTTGAAATGGCACTAGAAC
GGCTCAATGAAGGGGAATTGGTAGAACTTGACGAAGAACGAAAAGCTGCCATGGTTTCAAATCTCCTTGTCGTTCTTTGT
GGCAATCATGATGCACAACCAATTGTCAACACAGGAAGTCTTTACTAA

Upstream 100 bases:

>100_bases
TTATTGGGCTGAAAGTTTTTAGTGATTATTTTCAACTTTCTATTGACTTTTAAAAACAAAGTGATATCATTTAGATATCA
AATAATGGGAGGTCATTCTT

Downstream 100 bases:

>100_bases
AGATGGCTGAAGCTAAAAAAAAGCAGATCCCCCTTCGACTCTCAACAAAGTTATACGCTGCACTCGCATCATGGGCAGAA
GACGACTTTCGTTCAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTEKLINSKPNGVFALILIELTIVLGIFIFIMGVGSENIFGIIIGPLLIVIAGLAHAGLKVVKPQEALVLTLFGNYTGTI
KEPGFYFVNPFSVAVNPANHTRLGQSGDVSTKSPFLGAKSSNDNDVNLEIGKKHISLKVMTLSNSRQKINDCLGNPVEIG
IAVTWRVVDTAKAVFNVDNYKEYLSLQCDSALRNIVRIYPYDVSPNVDTTGDGQADEGSLRGSSEIVANRIREEIQSRVE
DAGLEILEARITYLAYAPEIAAVMLQRQQASAIIDARKMIVDGAVGMVEMALERLNEGELVELDEERKAAMVSNLLVVLC
GNHDAQPIVNTGSLY

Sequences:

>Translated_335_residues
MTEKLINSKPNGVFALILIELTIVLGIFIFIMGVGSENIFGIIIGPLLIVIAGLAHAGLKVVKPQEALVLTLFGNYTGTI
KEPGFYFVNPFSVAVNPANHTRLGQSGDVSTKSPFLGAKSSNDNDVNLEIGKKHISLKVMTLSNSRQKINDCLGNPVEIG
IAVTWRVVDTAKAVFNVDNYKEYLSLQCDSALRNIVRIYPYDVSPNVDTTGDGQADEGSLRGSSEIVANRIREEIQSRVE
DAGLEILEARITYLAYAPEIAAVMLQRQQASAIIDARKMIVDGAVGMVEMALERLNEGELVELDEERKAAMVSNLLVVLC
GNHDAQPIVNTGSLY
>Mature_334_residues
TEKLINSKPNGVFALILIELTIVLGIFIFIMGVGSENIFGIIIGPLLIVIAGLAHAGLKVVKPQEALVLTLFGNYTGTIK
EPGFYFVNPFSVAVNPANHTRLGQSGDVSTKSPFLGAKSSNDNDVNLEIGKKHISLKVMTLSNSRQKINDCLGNPVEIGI
AVTWRVVDTAKAVFNVDNYKEYLSLQCDSALRNIVRIYPYDVSPNVDTTGDGQADEGSLRGSSEIVANRIREEIQSRVED
AGLEILEARITYLAYAPEIAAVMLQRQQASAIIDARKMIVDGAVGMVEMALERLNEGELVELDEERKAAMVSNLLVVLCG
NHDAQPIVNTGSLY

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36331; Mature: 36200

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKLINSKPNGVFALILIELTIVLGIFIFIMGVGSENIFGIIIGPLLIVIAGLAHAGLK
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VVKPQEALVLTLFGNYTGTIKEPGFYFVNPFSVAVNPANHTRLGQSGDVSTKSPFLGAKS
EECCCCEEEEEEECCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
SNDNDVNLEIGKKHISLKVMTLSNSRQKINDCLGNPVEIGIAVTWRVVDTAKAVFNVDNY
CCCCEEEEEECCEEEEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHCCCCH
KEYLSLQCDSALRNIVRIYPYDVSPNVDTTGDGQADEGSLRGSSEIVANRIREEIQSRVE
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DAGLEILEARITYLAYAPEIAAVMLQRQQASAIIDARKMIVDGAVGMVEMALERLNEGEL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCE
VELDEERKAAMVSNLLVVLCGNHDAQPIVNTGSLY
EEECHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEKLINSKPNGVFALILIELTIVLGIFIFIMGVGSENIFGIIIGPLLIVIAGLAHAGLK
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VVKPQEALVLTLFGNYTGTIKEPGFYFVNPFSVAVNPANHTRLGQSGDVSTKSPFLGAKS
EECCCCEEEEEEECCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
SNDNDVNLEIGKKHISLKVMTLSNSRQKINDCLGNPVEIGIAVTWRVVDTAKAVFNVDNY
CCCCEEEEEECCEEEEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHCCCCH
KEYLSLQCDSALRNIVRIYPYDVSPNVDTTGDGQADEGSLRGSSEIVANRIREEIQSRVE
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DAGLEILEARITYLAYAPEIAAVMLQRQQASAIIDARKMIVDGAVGMVEMALERLNEGEL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCE
VELDEERKAAMVSNLLVVLCGNHDAQPIVNTGSLY
EEECHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA