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The map label for this gene is yqjA [H]

Identifier: 116517163

GI number: 116517163

Start: 1583934

End: 1584887

Strand: Direct

Name: yqjA [H]

Synonym: SPD_1564

Alternate gene names: 116517163

Gene position: 1583934-1584887 (Clockwise)

Preceding gene: 116516711

Following gene: 116516515

Centisome position: 77.41

GC content: 44.97

Gene sequence:

>954_bases
ATGTCTATTAGCCAACGTACGACCAAGCTCATCTTAGCTACCTGTCTTGCCTGCCTGTTTGCTTATTTTCTCAATCTTTC
GTCAGCAGTTTCGGCTGGAATTATCGCTCTCTTGAGCCTATCTGATACGCGTAGAAGTACTTTAAAACTGGCTCGCAATC
GTCTTTTTTCTATGCTTCTAGCTCTGGCTATCGGTGTTCTAGCTTTTCACTTGAGCGGATTTCATATCTGGAGTCTCGGC
CTCTATCTGGCCTTCTACGTTCCTTTAGCCTACAAGATGGGCTGGGAAATTGGCATCACACCAAGCACTGTTTTGGTTAG
CCATCTCTTGGTTCAAGAGTCAACCTCTCCAGACCTTCTAGTCAATGAATTCCTTCTCTTTGCTATCGGTACAGGATTTG
CTTTACTGGTCAATCTCTACATGCCTTCACGAGAAGAGGAAATCCAGCACTACCACACGCTGGTGGAAGAAAAGTTAAAA
GATATCCTCCAGCGCTTCAAATACTATTTATCCAGAGGAGACGGACGCAACCGAGCACAGCTGGTAGCAGAATTAGACAC
GCTTTTGAAAGAAGCCCTCAGACTGGTCTATTTGGATCACTCTGACCACCTCTTTCACCAGACCGACTACCATATCCACT
ACTTTGAGATGAGACAGCGACAAAGTCGTATCCTGAGAAACATGGCCCAACAGATTAACACTTGTCACCTTGCCGCCAGT
GAAAGCCTGATCTTAGCGCAACTCTTTTCAAAAATTGCAGGTCAACTGAGCCAGACCAATCCTGCTTCTGATTTGCTAGA
TGAAATTGAACGTTATCTGGAAGTCTTCCGGAACCGCAGTCTGCCCAAGACAAGAGAAGAATTTGAAACCCGCGCCACCC
TTCTTCAACTCCTACGTGAAGCCAAAACCTTCATCCAAGTAAAAGTTGATTTTTACCAAAAATATAGACAGTAA

Upstream 100 bases:

>100_bases
GTTGCCGAATACGCAGCAACCCGTAAAAAATAACTCATCAAGGCAAGTCTGCTCATGTCTTGTCTTTTACGCTTTTATTC
TAACTTATTAGGAAATTCTT

Downstream 100 bases:

>100_bases
AAAAGAAAACCACTAAAAAACAGAGCTTGCCAGCATTCTTGAAAAGTAGTATAATTATTGCATGCGCAATCATCTTGTGA
CGCAGAGACTGCCCGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLG
LYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLK
DILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ

Sequences:

>Translated_317_residues
MSISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLG
LYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLK
DILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ
>Mature_316_residues
SISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLGL
YLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKD
ILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAASE
SLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 36540; Mature: 36409

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKTFIQVKVDFYQKYRQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKTFIQVKVDFYQKYRQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]