| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is smtA [C]
Identifier: 116517093
GI number: 116517093
Start: 1426853
End: 1427611
Strand: Reverse
Name: smtA [C]
Synonym: SPD_1408
Alternate gene names: 116517093
Gene position: 1427611-1426853 (Counterclockwise)
Preceding gene: 116515506
Following gene: 116516257
Centisome position: 69.77
GC content: 36.5
Gene sequence:
>759_bases ATGTCAGAAGCAGGTCATAAGTTTTTAGCAAAATTGGGGAAAAAACGCTTACGTCCAGGTGGAAAGCGTGCCACAGATTG GTTAATTGCAGAAGGAGGATTTTCAAAAGAAAAGAGAATACTAGAGGTTGCGTGTAATAGGGGAACTACAGCAATTGAGT TGGCACAGCGTTTTGGTTGCAAGATAACTGCTGTTGATATGGATGCTCAAGCTTTAGAAGTGGCTAAAAAATCTGCTGGA ACGGCAGGTGTTGCTCATTTAATCAGTTTTGAAAGAGCAAATGCAATGAAACTTCCTTATCAAGATGCTAGTTTTGATAT TGTTATAAATGAAGCTATGCTGACTATGCAAGCCGATCAAGCTAAGAAAAAATGTGTAATGGAATATCTAAGGGTATTAA AACCTGGAGGTCTTCTCTTGACACATGATGTGCTTCTTAAGGAAGCTAAAGAGTCTATCAGACAGGAATTATCACAAGCA ATTCATGTAAATGTAGGTCCTTTAACTCAAGATGGTTGGGAACAGGTGATGATAGAATCAGGTTATTGTGATGTGAAAGC ATTGACTGGTGAAATGACATTAATGAAATTATCGGGTATGATTTATGACGAAGGTTTGCTAGGAACTTTGAAAATTTGTG TAAATGCTTGTAAAAAGGAGAATAGAAAGCAGTTTTTAACTATGTATAAAATGTTTGCTAAGAATAAACAGAAATTGGGC TTTATTGCGATGGCTAGTTATAAATCGTCAAAACGTTAG
Upstream 100 bases:
>100_bases GTGACTTGTATGCTTTTGATTCTAGTTTATCAAATAATAGATTAGAATTGTCAGATAATATCATTTTGTGTTATAATGAA GAAAAAACAGAGGTGTTCAA
Downstream 100 bases:
>100_bases ATAATTATTGAAGTTAACTTTTCCTTTTTTCTTTCTTAAAAAATATGCTATAATAGAGAGTAAAAAACTTTGAAAGAAAG AAAAAAGATGAATTTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSEAGHKFLAKLGKKRLRPGGKRATDWLIAEGGFSKEKRILEVACNRGTTAIELAQRFGCKITAVDMDAQALEVAKKSAG TAGVAHLISFERANAMKLPYQDASFDIVINEAMLTMQADQAKKKCVMEYLRVLKPGGLLLTHDVLLKEAKESIRQELSQA IHVNVGPLTQDGWEQVMIESGYCDVKALTGEMTLMKLSGMIYDEGLLGTLKICVNACKKENRKQFLTMYKMFAKNKQKLG FIAMASYKSSKR
Sequences:
>Translated_252_residues MSEAGHKFLAKLGKKRLRPGGKRATDWLIAEGGFSKEKRILEVACNRGTTAIELAQRFGCKITAVDMDAQALEVAKKSAG TAGVAHLISFERANAMKLPYQDASFDIVINEAMLTMQADQAKKKCVMEYLRVLKPGGLLLTHDVLLKEAKESIRQELSQA IHVNVGPLTQDGWEQVMIESGYCDVKALTGEMTLMKLSGMIYDEGLLGTLKICVNACKKENRKQFLTMYKMFAKNKQKLG FIAMASYKSSKR >Mature_251_residues SEAGHKFLAKLGKKRLRPGGKRATDWLIAEGGFSKEKRILEVACNRGTTAIELAQRFGCKITAVDMDAQALEVAKKSAGT AGVAHLISFERANAMKLPYQDASFDIVINEAMLTMQADQAKKKCVMEYLRVLKPGGLLLTHDVLLKEAKESIRQELSQAI HVNVGPLTQDGWEQVMIESGYCDVKALTGEMTLMKLSGMIYDEGLLGTLKICVNACKKENRKQFLTMYKMFAKNKQKLGF IAMASYKSSKR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27931; Mature: 27800
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAGHKFLAKLGKKRLRPGGKRATDWLIAEGGFSKEKRILEVACNRGTTAIELAQRFGC CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCC KITAVDMDAQALEVAKKSAGTAGVAHLISFERANAMKLPYQDASFDIVINEAMLTMQADQ EEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHH AKKKCVMEYLRVLKPGGLLLTHDVLLKEAKESIRQELSQAIHVNVGPLTQDGWEQVMIES HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC GYCDVKALTGEMTLMKLSGMIYDEGLLGTLKICVNACKKENRKQFLTMYKMFAKNKQKLG CCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FIAMASYKSSKR EEEEECCCCCCC >Mature Secondary Structure SEAGHKFLAKLGKKRLRPGGKRATDWLIAEGGFSKEKRILEVACNRGTTAIELAQRFGC CCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCC KITAVDMDAQALEVAKKSAGTAGVAHLISFERANAMKLPYQDASFDIVINEAMLTMQADQ EEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHH AKKKCVMEYLRVLKPGGLLLTHDVLLKEAKESIRQELSQAIHVNVGPLTQDGWEQVMIES HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC GYCDVKALTGEMTLMKLSGMIYDEGLLGTLKICVNACKKENRKQFLTMYKMFAKNKQKLG CCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FIAMASYKSSKR EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]