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The map label for this gene is 116517019

Identifier: 116517019

GI number: 116517019

Start: 1281817

End: 1282026

Strand: Reverse

Name: 116517019

Synonym: SPD_1253

Alternate gene names: NA

Gene position: 1282026-1281817 (Counterclockwise)

Preceding gene: 116515882

Following gene: 116516827

Centisome position: 62.66

GC content: 43.33

Gene sequence:

>210_bases
GTGGCTAAAAATTTAAAATTAAAATTAGCTCGGGTAGAGCGTGATTTAACACAAGGTCAACTGGCAGAGGCTGTCGGGGT
GACACGCCAGACTATTGGTTTGATAGAGGCGGGAAAATACAATCCCAGTCTCTCGCTCTGCCAGTCTATTTGCAGATGTT
TAGGGAAAACCCTAGACCAACTATTTTGGGAGGAAGAAGATGAAAAATAG

Upstream 100 bases:

>100_bases
GGAGTGCAAATTAATGGGGTTATAATAAATAGCTGATAGCTTGTGTTGGTTTTGGATTTTTTAAGAGTAGATGAGTATTA
AAACTATAAGGAGGACGAAG

Downstream 100 bases:

>100_bases
ATTTTATTATTATCAATTACTAGACGAAAGAGAAGAACAACTGTTCAATAAAGCGGGCTCTGAAAGTTTCTATATCTGCA
TTGCTTTGTCGCTCCTATCT

Product: transcriptional repressor

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Transcriptional Repressor; Helix-Turn-Helix Domain Protein; Cro/CI Family Transcriptional Regulator; Transcription Regulator; PbsX Family Transcriptional Regulator

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MAKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQLFWEEEDEK

Sequences:

>Translated_69_residues
MAKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQLFWEEEDEK
>Mature_68_residues
AKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQLFWEEEDEK

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7752; Mature: 7621

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LFWEEEDEK
HHHCCCCCC
>Mature Secondary Structure 
AKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LFWEEEDEK
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA