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The map label for this gene is 116516817

Identifier: 116516817

GI number: 116516817

Start: 1409712

End: 1410560

Strand: Reverse

Name: 116516817

Synonym: SPD_1388

Alternate gene names: NA

Gene position: 1410560-1409712 (Counterclockwise)

Preceding gene: 116515411

Following gene: 116515624

Centisome position: 68.94

GC content: 42.17

Gene sequence:

>849_bases
ATGAAATTAGCTGTTTTCACAGATTCCTCTGCTTATCTCAGTGCAGAGACCTTGCAAAGAGAAGACTTGTTTGTCTTGGA
TATTCCTGTCAATATTGATGGTGAGGAATATGTCGAAGGCATCAATCTGTCTGCTGAGGAATTTTACCAAAAAATGGCTC
AGGCTTCTGAATTGCCTAAGACCAGTCAACCAAGTATTGCCAAGTTAGATGAGATCTTAACTTCGCTCAAAGAACAAGGC
TATACACATGCCTTGGGGCTTTTCCTATCTTCTGGAATTTCAGGTTTTTACCAAAGTATCCAGTATATGGTCGATGACTA
TGAGGGCTTAACCATTGCTTTCCCAGACACTTTGATTACAAGTGCTCCCCTAGGCATCATGGTTGAAAGCGTCTTTAATT
GGCGTGATCAGGGCGATGATTTTGCCAGCATTCAGGATAAGCTAGCCATTCAAATCAGCCGTACGTCAGCCTTTATCATG
GTAGATGACTTGGATCATTTGGTAAAAGGTGGACGCCTTTCAAATGGGGCTGCCATTTTGGGCAATTTGCTTAGCATTAA
GCCAATCCTTTATTTTAACGATCAAGGTGTGATTGAAGTTTACGAAAAAGTTCGTACTGAAAAGAAGGCCACCAAGCGCT
TAATTGAAATTATCAAGGAAACAACGGCTTCAGGTCAATACCGGGTCATTGTCATTCATGGGAATGCTCCTGAAAAGGCT
GAAGAATTGCGTCAGCACTTGCTTGATTTTGGCTTGGGTTCGGATGTTTCACTTGCTACATTTGGTAGTGTCATTGGAAC
GCACCTAGGAGCAGGAAGTATTGCTCTGGGTTATATTCCAGTGATTTAG

Upstream 100 bases:

>100_bases
GAAACCTTGGCTCGTCCATGTTTGAACATGCTCAATCGTTTGACTTACGAAGTGACTGAAATTGCATTAGACTTACCAGG
AATTAATTTGGAGTTCTAAT

Downstream 100 bases:

>100_bases
TTGGCGCTTCTAGGCTAGTTAAGATGCCTTGTATCTTAGAAATTGAACACGGACTACCTGCCTCTTGAAAAAAGATGCCT
GTCTTGCCTTTCGTGGAAAG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKLAVFTDSSAYLSAETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQSIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI

Sequences:

>Translated_282_residues
MKLAVFTDSSAYLSAETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQSIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
>Mature_282_residues
MKLAVFTDSSAYLSAETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQSIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1415_STRR6 (Q8DP17)

Other databases:

- EMBL:   AE007317
- PIR:   F98048
- RefSeq:   NP_359008.1
- ProteinModelPortal:   Q8DP17
- STRING:   Q8DP17
- EnsemblBacteria:   EBSTRT00000014752
- GeneID:   934169
- GenomeReviews:   AE007317_GR
- KEGG:   spr:spr1415
- eggNOG:   COG1307
- GeneTree:   EBGT00050000027202
- HOGENOM:   HBG729520
- OMA:   PAPGEFI
- ProtClustDB:   CLSK876890
- BioCyc:   SPNE171101:SPR1415-MONOMER
- InterPro:   IPR003797
- TIGRFAMs:   TIGR00762

Pfam domain/function: PF02645 DegV

EC number: NA

Molecular weight: Translated: 30891; Mature: 30891

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS51482 DEGV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVFTDSSAYLSAETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPK
CEEEEEECCCCEEEHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
TSQPSIAKLDEILTSLKEQGYTHALGLFLSSGISGFYQSIQYMVDDYEGLTIAFPDTLIT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHH
SAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIMVDDLDHLVKGGRLSNGAAIL
CCCHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCEEEEEEECHHHHHCCCCCCCCHHHH
GNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
HHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECEEECC
>Mature Secondary Structure
MKLAVFTDSSAYLSAETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPK
CEEEEEECCCCEEEHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
TSQPSIAKLDEILTSLKEQGYTHALGLFLSSGISGFYQSIQYMVDDYEGLTIAFPDTLIT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHH
SAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIMVDDLDHLVKGGRLSNGAAIL
CCCHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCEEEEEEECHHHHHCCCCCCCCHHHH
GNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
HHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234