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The map label for this gene is insI1 [C]

Identifier: 116516748

GI number: 116516748

Start: 1355902

End: 1356909

Strand: Reverse

Name: insI1 [C]

Synonym: SPD_1342

Alternate gene names: 116516748

Gene position: 1356909-1355902 (Counterclockwise)

Preceding gene: 116515322

Following gene: 116515363

Centisome position: 66.32

GC content: 39.98

Gene sequence:

>1008_bases
ATGCAAGACAATTATACTACAAAAGCCAAACATTTGACAATCGATAGCCGTCGCTTAATCGAAAGATGGAAAAAAGAAGG
GAAATCAAATAGAGAAATTGCCTCTCTACTTGGAAAAGCTCCTCAAACTATCCACACTGAAATCAAGCGTGGGACAGTCC
GACAATGTCTTGGAAAAGGGCGCTTCAAAGAGGTTTATTCTGCCGACTATGCTCAACAGTCTTATGAAAACAATCGCAAG
CGCTCGGTCAAGAAATCAAGCGTGACCAAGGAACTAAAGGAAAAAATTCTCCACTATCATAACCAAAAATTTTCGCCTGA
AATGATGGTGATGGCTAAAGGGGTTAACGTGGGAATTTCAACCATTTACTATTGGATTCATCATGGAAAATTGGGGTTAA
GCAAACAGGATCTGCTTTACCCTAGAAAAGGAAAAGCGCTTAAGAAACAGGCTAGCACCAACTTTAAACCTGTTGGTCAA
TCCATCGAACAGCGGTCTGAAGCTATCAATCTTCGCTTGGAGAATGGGCATTATGAGATTGATACGGTTCTACTTACGAG
AGCGAAAAACTACTGCTTGCTTGTCTTGACGGATCGAAAGAGTAGACATCAGATCATCCGATTGATTCCAAATAAAAGTG
CTGAGGTGGTCAATCAGGCTCTAAAACTCATCTTAAAACAACACAAGATTCTTTCCATCACGGCAGATAATGGAACGGAA
TTCAATCGCTTGTTTGATGTATTTTCTGAGGAGCACATCTATTATGCGCACCCCTATGCCTCTTGGGAAAGGGGAACTAA
TGAGAATCATAACAGGTTCATTCGTAGATGGTTACCTAAGGGAACCAATAAAATGACTCCCAAAGAAGTCGCATTCATCG
AAAAGTGGATCAACAACTATCCTAAAAAATACTTGGACTACAAGTCACCCAGAGAAGACTTCTGGATGGCTAACTTGAAC
TTGAAATTTAGCAAAATGGAAATAATTTTTATTAAACGCTTCCAATAG

Upstream 100 bases:

>100_bases
ATCCAAAAGAAAATGGAAATAATGAAAGCTCTTGTAGGCATAAGAAAACACCTCTGTGTTATACTTGTTGTTCAACCACA
AACACAAGAAAGGCACAGAA

Downstream 100 bases:

>100_bases
CGGTTAAAAGTTGACAAATTTAAATTTTAGGACTACACTAAGTAAGTAAATTTTATTTTAAAGGAGAATTTGTTATGAAT
TTAACATTTTTAGGCTTATG

Product: IS1239, transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRGTVRQCLGKGRFKEVYSADYAQQSYENNRK
RSVKKSSVTKELKEKILHYHNQKFSPEMMVMAKGVNVGISTIYYWIHHGKLGLSKQDLLYPRKGKALKKQASTNFKPVGQ
SIEQRSEAINLRLENGHYEIDTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTE
FNRLFDVFSEEHIYYAHPYASWERGTNENHNRFIRRWLPKGTNKMTPKEVAFIEKWINNYPKKYLDYKSPREDFWMANLN
LKFSKMEIIFIKRFQ

Sequences:

>Translated_335_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRGTVRQCLGKGRFKEVYSADYAQQSYENNRK
RSVKKSSVTKELKEKILHYHNQKFSPEMMVMAKGVNVGISTIYYWIHHGKLGLSKQDLLYPRKGKALKKQASTNFKPVGQ
SIEQRSEAINLRLENGHYEIDTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTE
FNRLFDVFSEEHIYYAHPYASWERGTNENHNRFIRRWLPKGTNKMTPKEVAFIEKWINNYPKKYLDYKSPREDFWMANLN
LKFSKMEIIFIKRFQ
>Mature_335_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRGTVRQCLGKGRFKEVYSADYAQQSYENNRK
RSVKKSSVTKELKEKILHYHNQKFSPEMMVMAKGVNVGISTIYYWIHHGKLGLSKQDLLYPRKGKALKKQASTNFKPVGQ
SIEQRSEAINLRLENGHYEIDTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTE
FNRLFDVFSEEHIYYAHPYASWERGTNENHNRFIRRWLPKGTNKMTPKEVAFIEKWINNYPKKYLDYKSPREDFWMANLN
LKFSKMEIIFIKRFQ

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=329, Percent_Identity=30.0911854103343, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787671, Length=329, Percent_Identity=30.0911854103343, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786450, Length=329, Percent_Identity=30.0911854103343, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 39508; Mature: 39508

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRGTVRQCLGKG
CCCCCCCCHHEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RFKEVYSADYAQQSYENNRKRSVKKSSVTKELKEKILHYHNQKFSPEMMVMAKGVNVGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
TIYYWIHHGKLGLSKQDLLYPRKGKALKKQASTNFKPVGQSIEQRSEAINLRLENGHYEI
HHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCEEE
DTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTE
HHHEEECCCCEEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCH
FNRLFDVFSEEHIYYAHPYASWERGTNENHNRFIRRWLPKGTNKMTPKEVAFIEKWINNY
HHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
PKKYLDYKSPREDFWMANLNLKFSKMEIIFIKRFQ
CHHHCCCCCCCCCEEEEECCEEEEEEEEEEEEECC
>Mature Secondary Structure
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRGTVRQCLGKG
CCCCCCCCHHEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RFKEVYSADYAQQSYENNRKRSVKKSSVTKELKEKILHYHNQKFSPEMMVMAKGVNVGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
TIYYWIHHGKLGLSKQDLLYPRKGKALKKQASTNFKPVGQSIEQRSEAINLRLENGHYEI
HHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCEEE
DTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTE
HHHEEECCCCEEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCH
FNRLFDVFSEEHIYYAHPYASWERGTNENHNRFIRRWLPKGTNKMTPKEVAFIEKWINNY
HHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
PKKYLDYKSPREDFWMANLNLKFSKMEIIFIKRFQ
CHHHCCCCCCCCCEEEEECCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]