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The map label for this gene is ideR [H]

Identifier: 116516746

GI number: 116516746

Start: 1466204

End: 1466854

Strand: Direct

Name: ideR [H]

Synonym: SPD_1450

Alternate gene names: 116516746

Gene position: 1466204-1466854 (Clockwise)

Preceding gene: 116516926

Following gene: 116517144

Centisome position: 71.66

GC content: 43.93

Gene sequence:

>651_bases
ATGACCCCAAACAAAGAAGACTATCTAAAATGTATTTATGAAATTGGCATAGACCTGCATAAGATTACCAACAAGGAAAT
TGCGGCTCGCATGCAAGTCTCTCCCCCTGCCGTAACTGAAATGATCAAACGAATGAAAAGTGAAAATCTCATCCTAAAGG
ACAAGGAATGTGGCTATCTACTGACTGACCTCGGTCTCAAACTGGTCTCTGAGCTCTATCGTAAGCACCGCTTGATTGAA
GTTTTTCTAGTTCATCATTTAGACTATACAAGTGACCAGATTCACGAGGAAGCTGAGGTCTTGGAACACACTGTCTCTGA
CCTGTTCGTGGAAAGACTAGATAAACTGCTAGGTTTCCCTAAAACCTGCCCCCACGGAGGAACTATTCCTGCCAAGGGAG
AACTCCTCGTTGAAATCAATAACCTCCCACTAGCTGATATCAAGGAAGCTGGCGCCTACCGCCTGACTCGGGTGCACGAT
AATTTTGACATTCTCCATTATCTGGACAAGCACTCACTTCACATCGGTGACCAGCTCCAAGTCAAGCAGTTTGATGGCTT
CAGCAATACCTTCACTATCCTCAGTAACGACGAGGATTTACAAGTGAATATGGACATTGCAAAACAACTCTATGTCGAGA
AAATCAACTAA

Upstream 100 bases:

>100_bases
CGTTTTTTCTCTTGCAATAAGTATAACATAAAAAGTCACAGCTAGAGAAATCTAGCTTTTTTTGATATACTAGATAAAGA
TATTAGACAAGAGGAAACGA

Downstream 100 bases:

>100_bases
TTTCTCAAGTCCCCTACCAACCCTGAAAGTTTTATTTTCAGGGTTTTATTTCTATCATTTTATTTTACTTTCATTTGGTG
GGAGAATATTTGAAAAAAAG

Product: iron-dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYLLTDLGLKLVSELYRKHRLIE
VFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFPKTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHD
NFDILHYLDKHSLHIGDQLQVKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEKIN

Sequences:

>Translated_216_residues
MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYLLTDLGLKLVSELYRKHRLIE
VFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFPKTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHD
NFDILHYLDKHSLHIGDQLQVKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEKIN
>Mature_215_residues
TPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYLLTDLGLKLVSELYRKHRLIEV
FLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFPKTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDN
FDILHYLDKHSLHIGDQLQVKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEKIN

Specific function: Metal-dependent DNA-binding protein that controls transcription of many genes involved in iron metabolism [H]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007167
- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress; PF04023 FeoA [H]

EC number: NA

Molecular weight: Translated: 24853; Mature: 24722

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL
CCCCHHHHHHHHHHHCCHHHHHCCHHHHHEECCCCHHHHHHHHHHCCCCCEEECCCCCHH
LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDNFDILHYLDKHSLHIGDQLQ
CCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEE
VKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEKIN
EEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
TPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL
CCCHHHHHHHHHHHCCHHHHHCCHHHHHEECCCCHHHHHHHHHHCCCCCEEECCCCCHH
LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDNFDILHYLDKHSLHIGDQLQ
CCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEE
VKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEKIN
EEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]