| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516688
Identifier: 116516688
GI number: 116516688
Start: 1270915
End: 1271304
Strand: Reverse
Name: 116516688
Synonym: SPD_1241
Alternate gene names: NA
Gene position: 1271304-1270915 (Counterclockwise)
Preceding gene: 116515390
Following gene: 116517056
Centisome position: 62.13
GC content: 38.46
Gene sequence:
>390_bases ATGGGTAAATTATCCTCAATCCTTTTAGGAACGGTTTCAGGTGCAGCTCTTGCCTTGTTTTTAACAAGTGATAAGGGCAA ACAAGTTTGCAGTCAGGCTCAAGATTTTCTAGATGATTTGAGAGAAGATCCGGAGTATGCCAAGGAGCAAGTCTGTGAAA AACTGACAGAAGTTAAGGAGCAGGCTACAGATTTTGTTCTGAAAACAAAAGAACAGGTTGAGTCAGGTGAAATCACTGTG GACAGTATACTTGCTCAAGCTAAATCCTATGCTTTTCAAGCGACAGAAGCATCAAAAAATCAATTAAATAATCTCAAGGA ACAATGGCAAGAAAAAGCCGAAGCTCTTGATGACTCAGAAGAGATTGTGATTCATATAACAGAAGAATAA
Upstream 100 bases:
>100_bases AGCTTCATCAGCTGGTTCAAAAACACTCAAGACTGGTGCAAGTCTGTCAGCTCTTCGTCTTGCAAGTAAATTTTTCAAAA AATAAAAAAGGAGAATCCTT
Downstream 100 bases:
>100_bases ACCATCACCATCTCCGGACGGACTATGTATCTGGGGATGGTGATTTTTATCTGGAATCTAGTCTTTGTGGTATAATAATT ACTATGCAGAAAAAACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGKLSSILLGTVSGAALALFLTSDKGKQVCSQAQDFLDDLREDPEYAKEQVCEKLTEVKEQATDFVLKTKEQVESGEITV DSILAQAKSYAFQATEASKNQLNNLKEQWQEKAEALDDSEEIVIHITEE
Sequences:
>Translated_129_residues MGKLSSILLGTVSGAALALFLTSDKGKQVCSQAQDFLDDLREDPEYAKEQVCEKLTEVKEQATDFVLKTKEQVESGEITV DSILAQAKSYAFQATEASKNQLNNLKEQWQEKAEALDDSEEIVIHITEE >Mature_128_residues GKLSSILLGTVSGAALALFLTSDKGKQVCSQAQDFLDDLREDPEYAKEQVCEKLTEVKEQATDFVLKTKEQVESGEITVD SILAQAKSYAFQATEASKNQLNNLKEQWQEKAEALDDSEEIVIHITEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14313; Mature: 14182
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLSSILLGTVSGAALALFLTSDKGKQVCSQAQDFLDDLREDPEYAKEQVCEKLTEVKE CCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QATDFVLKTKEQVESGEITVDSILAQAKSYAFQATEASKNQLNNLKEQWQEKAEALDDSE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EIVIHITEE CEEEEEECC >Mature Secondary Structure GKLSSILLGTVSGAALALFLTSDKGKQVCSQAQDFLDDLREDPEYAKEQVCEKLTEVKE CCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QATDFVLKTKEQVESGEITVDSILAQAKSYAFQATEASKNQLNNLKEQWQEKAEALDDSE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EIVIHITEE CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA