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The map label for this gene is 116516572

Identifier: 116516572

GI number: 116516572

Start: 1395667

End: 1397151

Strand: Direct

Name: 116516572

Synonym: SPD_1377

Alternate gene names: NA

Gene position: 1395667-1397151 (Clockwise)

Preceding gene: 116517197

Following gene: 116517171

Centisome position: 68.21

GC content: 33.8

Gene sequence:

>1485_bases
ATGAGAAACCTTTTATCCACAAAAGTTCAAAGACAATTACGCTTAATGGAAACCCTAATTCAGAATCGTAATTGGATGAA
ATTACATGAACTAGCCGAAAAATTAGGATGTACAGAACGAATCTTAAAAAGTGATTTAAATGAATTACGTATTGCCTTTC
CATCTATTAACATCCAATCTTCTGTTAACGGAATCATGATAGATTTAGAAGTTAACACTAGTGTAGAAGATATTTATCAA
TACTTTCTTGCTAATTCTCAATCTTTTCAATTACTAGAGTATATGTTCTTCAATGAGGGGCTACCTATTTATCGAACAAT
AGAAAATCTTTACTTTAGTAGTGCCAACCTCTATCGACTGGGCAGAAATATTACAAAGGTTCTTTCATCTCAGTTTCAAA
TTGAATTATCTTTTACTCCATCCGAGATACGTGGAAATGAGATCGATATTCGTTACTTTTTTGCCCAATACTTTTCTGAG
CGCTATTATTTCCTAGATTGGCCTTTTCCTGACCTTCCTGAGGAAGATTTAACAGAGTTTGCTGACTTCTTCTATAAAAT
CACAAATTATCCAATGCGATTTTCAATTTATAGAATGTACAAACTGATGATAGCTATCAGTATCCACAGGGTTAAAAATG
GTCACTTCATTGACCTCCCCAACCACTTTTACAAAGAATATTATCCTCTTTTAAAGAGCATTCCGAATTTCCAGGAGACA
CTTGCTTATTTCTCTAAACATTTTGGGCTTGAAATGACTCCAGATACAATCGCTCAAATTTTTATTTCTTTTCTTCAGAA
TGATATTTTCCTAGATCCTCAAGAATTCTTCAACTCTTTAGAAGATAACAGTCAAGCAAGATACTCTTACCAATTACTTA
GTCAAATATTAGAAGGCCTATCAAAACAATATAAGATTACTTTTACTAACCACGATGAGCTGATTTGGCATTTACACAAC
ACTGCTTTCTTTGAAAGACAGGAAATCTTTTCTACCCCAATCTTATTTGAACAAAAAGCATTGACGATTAAAAAATTTGA
AGTTTACTTCCCAGACTTTATGGGAAGTGCGCGTCAAGAATTGGCTCAATACCGTCAGGCAATTGGACAGCATGACCATC
CTGAACAGTTGGAACACTTGATGTACACCATCTTAACCCATGCTGAAAACCTCTCTACTCAGTTGTTAGAAAATCGACCA
CCTATCAAGGTTTTGATTATCAGTAACTTTGACCATGCTATATCCCTTACCTTTGTTGATATGCTTTCCTATTACTGTAA
TAACCGCTTTACCTTCGATATTTGGGATGAATTAAAAACAAGTCCTGAGATTTTAAATCAGACAGATTACGATATCATCG
TGTCTAATTTCTATATTCCAGGGATTACCAAGAAGTTTATTTGCCGAAATCATCTGTCAATCATGAATTTGGTTAATCAT
CTTAACACCTTATCAAATGAGATTCATTTGTCCAATACTTTATAA

Upstream 100 bases:

>100_bases
ATTCTAATTTTTCCGATTACTAACGACAATTTTCTTGCTCTAATTTTTTTATACTACTTAGACAAAAAAAGATATAATGA
ATTATGGAGGAAATACCCGT

Downstream 100 bases:

>100_bases
GTTATCAAAAAAGTCAGCATAATCGTGCTGACTTTTCTCTTATCTGATTTCTATACTTCCTTTACAAAAACCAATCCCTG
TGGTTGTGACAAATCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQSSVNGIMIDLEVNTSVEDIYQ
YFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRLGRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSE
RYYFLDWPFPDLPEEDLTEFADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQET
LAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILEGLSKQYKITFTNHDELIWHLHN
TAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQELAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRP
PIKVLIISNFDHAISLTFVDMLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNH
LNTLSNEIHLSNTL

Sequences:

>Translated_494_residues
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQSSVNGIMIDLEVNTSVEDIYQ
YFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRLGRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSE
RYYFLDWPFPDLPEEDLTEFADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQET
LAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILEGLSKQYKITFTNHDELIWHLHN
TAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQELAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRP
PIKVLIISNFDHAISLTFVDMLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNH
LNTLSNEIHLSNTL
>Mature_494_residues
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQSSVNGIMIDLEVNTSVEDIYQ
YFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRLGRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSE
RYYFLDWPFPDLPEEDLTEFADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQET
LAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILEGLSKQYKITFTNHDELIWHLHN
TAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQELAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRP
PIKVLIISNFDHAISLTFVDMLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNH
LNTLSNEIHLSNTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AtxA/AcpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013199
- InterPro:   IPR007737
- InterPro:   IPR013236
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08280 HTH_Mga; PF05043 Mga; PF08270 PRD_Mga [H]

EC number: NA

Molecular weight: Translated: 58840; Mature: 58840

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQS
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCHHHHEEECCCCEECC
SVNGIMIDLEVNTSVEDIYQYFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRL
CCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
GRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSERYYFLDWPFPDLPEEDLTEF
HHHHHHHHCCCEEEEEEECHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
ADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQET
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHHCCCHHHH
LAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILEGL
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
SKQYKITFTNHDELIWHLHNTAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQE
CCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCEECCCCCEEEEEEEECCHHCCHHHHH
LAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRPPIKVLIISNFDHAISLTFVD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
MLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNH
HHHHHHCCCEEEEEHHHCCCCHHHHCCCCCEEEEECEECCCCHHHHHHHHHHHHHHHHHH
LNTLSNEIHLSNTL
HHHHHCCEEECCCC
>Mature Secondary Structure
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQS
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCHHHHEEECCCCEECC
SVNGIMIDLEVNTSVEDIYQYFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRL
CCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
GRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSERYYFLDWPFPDLPEEDLTEF
HHHHHHHHCCCEEEEEEECHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
ADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQET
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHHCCCHHHH
LAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILEGL
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
SKQYKITFTNHDELIWHLHNTAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQE
CCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCEECCCCCEEEEEEEECCHHCCHHHHH
LAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRPPIKVLIISNFDHAISLTFVD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
MLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNH
HHHHHHCCCEEEEEHHHCCCCHHHHCCCCCEEEEECEECCCCHHHHHHHHHHHHHHHHHH
LNTLSNEIHLSNTL
HHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]