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The map label for this gene is yugI [H]

Identifier: 116516485

GI number: 116516485

Start: 1380045

End: 1380404

Strand: Reverse

Name: yugI [H]

Synonym: SPD_1366

Alternate gene names: 116516485

Gene position: 1380404-1380045 (Counterclockwise)

Preceding gene: 116515578

Following gene: 116516448

Centisome position: 67.46

GC content: 43.61

Gene sequence:

>360_bases
ATGAAAATCGGTGATAAGCTAAAGGGGCGTATTACAGGGATTCAGCCCTACGGTGCCTTTGTTGAGTTAGAGACGGGTGA
TACGGGGCTGATTCACATTTCAGAAATTCGGACAGGATTTATTGAAAATATTCATGAAACCTTGAAAGTCGATGAAGAGG
TTCAAGTTCAGGTAGTGGATTTAGATGAATTTACGGGGAAAGCCAGTCTTTCTATCCGCACTTTGGAGGAAGAAAAGTAC
CAGTTTCCTAGACGGAGACGCTTTTCAAGCGACCGCTTTAACTACGGTTTTGCTCCCTTTCGACGAATGCTACCAATCTG
GACTGGAGAAGCCCTGCACCATTTAAAAAAGAAGAAGTAG

Upstream 100 bases:

>100_bases
TCTTACGCTGTCTTGGATGTCATTGCTGCTGTTGAGACAGGAGCTATGGACAAGCCAGTTGAAGATGTTGTAATTGAAAC
TATTGAAATCGAGGACTAAG

Downstream 100 bases:

>100_bases
TTTAGAGTTTTATATTTTTTGTAATGTTAATATAAATTTGCTATAATAGGACCATGGAAGAAGAACAATTATTAAAATCA
GGAGAGCGCATTAACCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVDLDEFTGKASLSIRTLEEEKY
QFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK

Sequences:

>Translated_119_residues
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVDLDEFTGKASLSIRTLEEEKY
QFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK
>Mature_119_residues
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVDLDEFTGKASLSIRTLEEEKY
QFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 13852; Mature: 13852

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVD
CCCCCCCCCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LDEFTGKASLSIRTLEEEKYQFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK
CCCCCCCCEEEEEECCHHHHCCCHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVD
CCCCCCCCCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LDEFTGKASLSIRTLEEEKYQFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK
CCCCCCCCEEEEEECCHHHHCCCHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]