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The map label for this gene is yicL [H]

Identifier: 116516351

GI number: 116516351

Start: 1302582

End: 1303478

Strand: Reverse

Name: yicL [H]

Synonym: SPD_1276

Alternate gene names: 116516351

Gene position: 1303478-1302582 (Counterclockwise)

Preceding gene: 116516560

Following gene: 116516474

Centisome position: 63.71

GC content: 42.81

Gene sequence:

>897_bases
ATGTCAAATAGTTTAAAAGGGACTTTACTAACAGTTGTGGCTGGTATTGCTTGGGGGTTGTCAGGAACGAGTGGCCAATA
CCTAATGGCACACGGAATTTCGGCTCTGGTCTTGACCAACTTGCGTCTTTTAATCGCTGGTGGAATTCTCATGCTCTTGG
CTTATGCTACTGCAAAGGATAAAATACTGGTCTTTTTAAAGGATAGAAAGAGTTTGCTGTCTCTTCTTATTTTTGCTCTG
ATTGGTCTTTTTCTCAACCAATTCGCCTATCTGTCTGCTATTCAGGAGACCAATGCGGGAACAGCGACGGTGCTTCAGTA
TGTTTGTCCTGTCGGAATTTTAATTTATAGCTGTATCAAGGATAGGGTGGCACCGACACTGGGAGAGATAGTTTCCATCA
TATTCGCCATCGGAGGAACCTTCCTGATCGCAACACATGGGCAGTTGGACCAGTTATCCATGACACCTGCTGGCCTGTTC
TGGGGTCTCTTTTCTGCCTTGACTTATGCTCTATATATCATTTTACCCATAGCCTTGATTAAAAAGTGGGGGAGCAGCTT
GGTCATTGGTGTGGGAATGGTCATAGCAGGTTTGGTCGCCCTTCCTTTTACAGGGGTTCTACAGGCCGATATCCCGACTA
GTCTTGATTTTCTCCTTGCGTTTGCAGGCATTATCCTTATCGGGACTGTCTTTGCCTATACAGCTTTCCTTAAAGGAGCC
AGTCTGATAGGACCGGTCAAGTCAAGCTTGTTGGCTTCAATTGAGCCAATATCGGCGATTTTCTTTGCCTTCTTAATAAT
GAATGAACAATTTTATCCCATTGATTTTCTTGGTATGGCAATGATATTGTTTGCTGTAACTTTGATTTCTTTGAAAGATT
TATTCTTAGAAAAATAA

Upstream 100 bases:

>100_bases
TATCGAATCGTACCTATGAAAAAAAGGACGAGAGAGCTCAATGGATATTAGACCGCAATCAAGTGATGAACTTGATTCGC
AAAGAAGAGTAAGGAGAGAC

Downstream 100 bases:

>100_bases
AAAAGACTCTTTGTCCGTGACAGAGAGTTTTTGCGTGGTAATCTAATTATTTTCAAGATAAAATTCAAAGCGTTCGCCTA
CATATTGACTTTTTACGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDKILVFLKDRKSLLSLLIFAL
IGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIKDRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLF
WGLFSALTYALYIILPIALIKKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA
SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK

Sequences:

>Translated_298_residues
MSNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDKILVFLKDRKSLLSLLIFAL
IGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIKDRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLF
WGLFSALTYALYIILPIALIKKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA
SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK
>Mature_297_residues
SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDKILVFLKDRKSLLSLLIFALI
GLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIKDRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFW
GLFSALTYALYIILPIALIKKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGAS
LIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=294, Percent_Identity=37.0748299319728, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31740; Mature: 31609

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKD
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KILVFLKDRKSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA
HHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKD
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KILVFLKDRKSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA
HHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9311997 [H]