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The map label for this gene is 116516253

Identifier: 116516253

GI number: 116516253

Start: 1268959

End: 1269696

Strand: Reverse

Name: 116516253

Synonym: SPD_1239

Alternate gene names: NA

Gene position: 1269696-1268959 (Counterclockwise)

Preceding gene: 116517056

Following gene: 116516703

Centisome position: 62.05

GC content: 41.46

Gene sequence:

>738_bases
ATGGGCTTAACTTATCAAATGAAAATGAAAATTCCTTTTGATATGGCTGATATGAACGGTCATATCAAACTTCCAGATGT
GATTTTGCTGTCACTGCAAGTTTCAGGGATGCAATCGATTGAACTGGGAGTTAGTGATAAGGCCATTTTGGAAGACTATA
ATCTGGTCTGGATTATCGCAGAATATGATATTGAGGTGGTTCGTTTGCCTCGTTTTGCGGAAGAAATTACCATCGAAACG
GAAGCCTTGAGCTACAATCGACTTTTTTGCTACCGTCGCTTTACTATTTATAATGAAGCGGGGCAGGAGCTCATCCATAT
GATGGCGACCTTTGTTCTCATGGACCGCGACAGTCGAAAAGTCCATGCTGTTGAACCTGAGATTGTGGCTCCTTACCAGT
CTGATTTTGATAAAAAACTTATCCGTGGACCGAAGTATGAATCCTTGGAAGAGCCGATCAGCAAGGATTACCATGTTCGT
TTTTACGACTTGGATATGAATGGTCATGTCAATAACAGTAAATACTTGGACTGGATTTTTGAGGTCATGGGAGCGGATTT
TTTGACCCACTATATTCCCAAGAAAATCAACCTCAAGTATGTCAAGGAAGTTCGACCAGGTGGGGTGATTACATCGGCTG
TTGAACGGACTGGACTGGAAAGCAAGCATGAAATTACAAGTGATGGGGTTATCAATGCCCAAGCAATCATTACTTGGCAA
GAAATAAAAAAGGTTTAG

Upstream 100 bases:

>100_bases
CAAGGCCTCATGCAGATTGAGGGTGACCACGTTCGCATGACAAAGAGAGGTCTCTTTTTGGGAGATACTGTAGCAGAACG
ATTTATTTTGGAGTAGGATC

Downstream 100 bases:

>100_bases
GGAGAAATAGATGAAATATAAAGGCTATTTAATCGATTTAGACGGAACCATTTATAAGGGGAAAGACCGAATCCCTGCTG
GAGAGACTTTTGTTCATGAA

Product: acyl-ACP thioesterase

Products: NA

Alternate protein names: Acyl-Acyl Carrier Protein Thioesterase; Acyl-ACP Thioesterase Family Protein; Oleoyl-[Acyl-Carrier Protein] Thioesterase; Oleoyl-(Acyl-Carrier Protein) Thioesterase; Thioesterase Acyl-ACP Family; Oleoyl-[Acyl-Carrier-Protein] Hydrolase; Oleoyl-Acyl Carrier Protein Thioesterase; Acyl-Acyl-Carrier Protein Thioesterase; Acyl Carrier Protein Thioesterase-Like Protein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGLTYQMKMKIPFDMADMNGHIKLPDVILLSLQVSGMQSIELGVSDKAILEDYNLVWIIAEYDIEVVRLPRFAEEITIET
EALSYNRLFCYRRFTIYNEAGQELIHMMATFVLMDRDSRKVHAVEPEIVAPYQSDFDKKLIRGPKYESLEEPISKDYHVR
FYDLDMNGHVNNSKYLDWIFEVMGADFLTHYIPKKINLKYVKEVRPGGVITSAVERTGLESKHEITSDGVINAQAIITWQ
EIKKV

Sequences:

>Translated_245_residues
MGLTYQMKMKIPFDMADMNGHIKLPDVILLSLQVSGMQSIELGVSDKAILEDYNLVWIIAEYDIEVVRLPRFAEEITIET
EALSYNRLFCYRRFTIYNEAGQELIHMMATFVLMDRDSRKVHAVEPEIVAPYQSDFDKKLIRGPKYESLEEPISKDYHVR
FYDLDMNGHVNNSKYLDWIFEVMGADFLTHYIPKKINLKYVKEVRPGGVITSAVERTGLESKHEITSDGVINAQAIITWQ
EIKKV
>Mature_244_residues
GLTYQMKMKIPFDMADMNGHIKLPDVILLSLQVSGMQSIELGVSDKAILEDYNLVWIIAEYDIEVVRLPRFAEEITIETE
ALSYNRLFCYRRFTIYNEAGQELIHMMATFVLMDRDSRKVHAVEPEIVAPYQSDFDKKLIRGPKYESLEEPISKDYHVRF
YDLDMNGHVNNSKYLDWIFEVMGADFLTHYIPKKINLKYVKEVRPGGVITSAVERTGLESKHEITSDGVINAQAIITWQE
IKKV

Specific function: Unknown

COG id: COG3884

COG function: function code I; Acyl-ACP thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28391; Mature: 28260

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTYQMKMKIPFDMADMNGHIKLPDVILLSLQVSGMQSIELGVSDKAILEDYNLVWIIA
CCCEEEEEEECCEEEECCCCCEECCCEEEEEEEECCCEEEEECCCCHHHHCCCCEEEEEE
EYDIEVVRLPRFAEEITIETEALSYNRLFCYRRFTIYNEAGQELIHMMATFVLMDRDSRK
ECCEEEEECCCCHHHEEEEEHHCCCCEEEEEEEEEEECHHHHHHHHHHHHHHEECCCCCE
VHAVEPEIVAPYQSDFDKKLIRGPKYESLEEPISKDYHVRFYDLDMNGHVNNSKYLDWIF
EEEECCCEECCCCCCHHHHHHCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHH
EVMGADFLTHYIPKKINLKYVKEVRPGGVITSAVERTGLESKHEITSDGVINAQAIITWQ
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHH
EIKKV
HHHCC
>Mature Secondary Structure 
GLTYQMKMKIPFDMADMNGHIKLPDVILLSLQVSGMQSIELGVSDKAILEDYNLVWIIA
CCEEEEEEECCEEEECCCCCEECCCEEEEEEEECCCEEEEECCCCHHHHCCCCEEEEEE
EYDIEVVRLPRFAEEITIETEALSYNRLFCYRRFTIYNEAGQELIHMMATFVLMDRDSRK
ECCEEEEECCCCHHHEEEEEHHCCCCEEEEEEEEEEECHHHHHHHHHHHHHHEECCCCCE
VHAVEPEIVAPYQSDFDKKLIRGPKYESLEEPISKDYHVRFYDLDMNGHVNNSKYLDWIF
EEEECCCEECCCCCCHHHHHHCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHH
EVMGADFLTHYIPKKINLKYVKEVRPGGVITSAVERTGLESKHEITSDGVINAQAIITWQ
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHH
EIKKV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA