| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is galU [H]
Identifier: 116516192
GI number: 116516192
Start: 1888288
End: 1889187
Strand: Direct
Name: galU [H]
Synonym: SPD_1919
Alternate gene names: 116516192
Gene position: 1888288-1889187 (Clockwise)
Preceding gene: 116516995
Following gene: 116516055
Centisome position: 92.29
GC content: 43.11
Gene sequence:
>900_bases ATGACATCAAAAGTTAGAAAGGCAGTTATCCCTGCTGCTGGACTAGGAACTCGATTTTTACCAGCAACCAAGGCCCTTGC CAAAGAAATGTTGCCAATCGTAGACAAACCAACTATCCAGTTTATCGTGGAAGAGGCTCTCAAATCAGGTATTGAAGATA TTCTAGTTGTCACTGGTAAATCAAAACGTTCTATTGAGGACCACTTCGATTCAAACTTCGAATTGGAATATAACCTCAAA GAAAAAGGGAAAACAGATCTTTTGAAGCTAGTTGATGAAACAACTGGCATGCGTCTGCATTTTATCCGCCAAACTCATCC ACGCGGTCTCGGAGATGCTGTTTTGCAAGCCAAGGCTTTCGTCGGAAATGAACCTTTTGTCGTTATGCTTGGTGATGACT TGATGGATATCACAGACGAAAAGGCTGTTCCACTTACCAAACAACTCATGGATGACTACAAGCGTACCCACGCGTCTACT ATCGCTGTCATGCCAGTCCCTCATGACGAAGTATCTGCTTACGGGGTTATTGCTCCGCAAGGCGAAGGAAAAGATGGTCT TTACAGTGTTGAAACCTTTGTTGAAAAACCAGCTCCAGAGGACGCTCCTAGCGACCTTGCTATTATCGGACGCTACCTCC TCACGCCTGAAATTTTCCAAATCCTCGAAAACCAAGCTCCTGGTGCTGGAAATGAAATCCAACTTACTGATGCAATCGAT ACTCTTAATAAAACACAGCGTGTTTTTGCCCGTGAATTTACAGGAGCTCGTTACGACGTTGGGGATAAGTTTGGCTTTAT GAAAACATCTATTGACTACGCCCTCAAACATCCACAAGTCAAAGATGATTTGAAGAATTACCTCATCCAACTTGGAAAAG AATTGACTGAGAAGGAATAA
Upstream 100 bases:
>100_bases TTATCACGGAACCAATATCAAAGATGCCATTTATGACATCATGAACAATGAATTTAAAGCAGAAAATGAGTGGTCTTAAC CCTCTATAGAAAGGATTTTT
Downstream 100 bases:
>100_bases AATAAAAAGATAAGGTTCAAAAAATGCCTTATCTTTTTTCATTACACAAATTTTCTTTCAACTTCGTCACATTCCCATTC CCTTGTAGAAAAGCAAAATG
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTSKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSNFELEYNLK EKGKTDLLKLVDETTGMRLHFIRQTHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITDEKAVPLTKQLMDDYKRTHAST IAVMPVPHDEVSAYGVIAPQGEGKDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFQILENQAPGAGNEIQLTDAID TLNKTQRVFAREFTGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLIQLGKELTEKE
Sequences:
>Translated_299_residues MTSKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSNFELEYNLK EKGKTDLLKLVDETTGMRLHFIRQTHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITDEKAVPLTKQLMDDYKRTHAST IAVMPVPHDEVSAYGVIAPQGEGKDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFQILENQAPGAGNEIQLTDAID TLNKTQRVFAREFTGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLIQLGKELTEKE >Mature_298_residues TSKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKE KGKTDLLKLVDETTGMRLHFIRQTHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITDEKAVPLTKQLMDDYKRTHASTI AVMPVPHDEVSAYGVIAPQGEGKDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFQILENQAPGAGNEIQLTDAIDT LNKTQRVFAREFTGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLIQLGKELTEKE
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=296, Percent_Identity=43.5810810810811, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1788355, Length=281, Percent_Identity=43.4163701067616, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788351, Length=234, Percent_Identity=26.4957264957265, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1790224, Length=259, Percent_Identity=25.0965250965251, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789837, Length=225, Percent_Identity=28.4444444444444, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 33178; Mature: 33047
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGK CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECC SKRSIEDHFDSNFELEYNLKEKGKTDLLKLVDETTGMRLHFIRQTHPRGLGDAVLQAKAF CCCCHHHHCCCCCEEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH VGNEPFVVMLGDDLMDITDEKAVPLTKQLMDDYKRTHASTIAVMPVPHDEVSAYGVIAPQ CCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHCEEEEECCC GEGKDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFQILENQAPGAGNEIQLTDAID CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHH TLNKTQRVFAREFTGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLIQLGKELTEKE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGK CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECC SKRSIEDHFDSNFELEYNLKEKGKTDLLKLVDETTGMRLHFIRQTHPRGLGDAVLQAKAF CCCCHHHHCCCCCEEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH VGNEPFVVMLGDDLMDITDEKAVPLTKQLMDDYKRTHASTIAVMPVPHDEVSAYGVIAPQ CCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHCEEEEECCC GEGKDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFQILENQAPGAGNEIQLTDAID CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHH TLNKTQRVFAREFTGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLIQLGKELTEKE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]