| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516103
Identifier: 116516103
GI number: 116516103
Start: 1386201
End: 1386632
Strand: Reverse
Name: 116516103
Synonym: SPD_1374
Alternate gene names: NA
Gene position: 1386632-1386201 (Counterclockwise)
Preceding gene: 116515899
Following gene: 116516335
Centisome position: 67.77
GC content: 39.12
Gene sequence:
>432_bases ATGACGATTTTGTTTGTGGTTATCAGTGCTTCCTTTCTGTATATGGTTTCTCTTAGCATGAAACCCTATCAAACAGCTAA AAGTGAAGGAGAAAAATTAGCTCAGCAGTATGCAGGATTAGAGCAGGCTGATCAGGTTGATTTATACAATGGCTTGGAAT CTTATTACAGCGTTCTTGGTCGTAATAAACAGCAAGAAGCGCTTGCTGTCCTGATTGGTAAAGATGACCATAAGATTTAC GTTTATCAGCTAAATCAGGGTATTTCACAAGAAAAAGCAGAAACGGTTTCTAAGGAAAAGGGAGCTGGCGAGATTGACAA GATAACCTTTGGTCGTTATCAAGACAAGCCAATCTGGGAAGTTAAGTCAGGATCTGATTTTTATCTAGTAGATTTTGAAA CAGGAGCATTGGTCAATAAGGAGGGCCTATGA
Upstream 100 bases:
>100_bases ATATTCACTTGTAATAAAGCTTAATAGATGGTAAAATAGACGAGTGAAAAAAAGACAAAACAAAGCAAAAAATAATCTAC TGTGGCAGTATGGTCTAGGG
Downstream 100 bases:
>100_bases AACTATCCAACCGTGTTTTAGAAATGGAAGAAAGTGTGACTTTGGCTGCTGGAGCCCGTGCCAAAGCACTGAAGGCTGAG GGTAGAGATATTTTGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLGRNKQQEALAVLIGKDDHKIY VYQLNQGISQEKAETVSKEKGAGEIDKITFGRYQDKPIWEVKSGSDFYLVDFETGALVNKEGL
Sequences:
>Translated_143_residues MTILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLGRNKQQEALAVLIGKDDHKIY VYQLNQGISQEKAETVSKEKGAGEIDKITFGRYQDKPIWEVKSGSDFYLVDFETGALVNKEGL >Mature_142_residues TILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLGRNKQQEALAVLIGKDDHKIYV YQLNQGISQEKAETVSKEKGAGEIDKITFGRYQDKPIWEVKSGSDFYLVDFETGALVNKEGL
Specific function: Unknown
COG id: COG5353
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16050; Mature: 15919
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLG CEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC RNKQQEALAVLIGKDDHKIYVYQLNQGISQEKAETVSKEKGAGEIDKITFGRYQDKPIWE CCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEE VKSGSDFYLVDFETGALVNKEGL ECCCCCEEEEEECCCCEECCCCC >Mature Secondary Structure TILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLG EEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC RNKQQEALAVLIGKDDHKIYVYQLNQGISQEKAETVSKEKGAGEIDKITFGRYQDKPIWE CCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEE VKSGSDFYLVDFETGALVNKEGL ECCCCCEEEEEECCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA