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The map label for this gene is yfcC [C]

Identifier: 116516100

GI number: 116516100

Start: 1952608

End: 1954119

Strand: Direct

Name: yfcC [C]

Synonym: SPD_1978

Alternate gene names: 116516100

Gene position: 1952608-1954119 (Clockwise)

Preceding gene: 116517200

Following gene: 116516441

Centisome position: 95.43

GC content: 42.72

Gene sequence:

>1512_bases
ATGAGTGAAAAAGCTAAAAAAGGGTTTAAGATGCCTTCATCTTACACCGTATTATTGATAATCATTGCTATTATGGCAGT
GCTAACTTGGTTTATCCCTGCGGGGGCCTTTATAGAAGGTATTTACGAGACTCAGCCTCAAAATCCACAAGGGATTTGGG
ATGTCCTCATGGCACCGATTCGGGCTATGCTAGGTACTCATCCAGAGGAAGGTTCGCTCATTAAAGAAACGAGCGCAGCG
ATTGATGTAGCCTTCTTCATCCTTATGGTTGGGGGTTTCCTTGGCATTGTCAACAAAACTGGTGCTCTTGACGTAGGGAT
TGCCTCTATCGTGAAGAAGTATAAGGGCCGCGAAAAAATGTTAATTTTGGTACTGATGCCTTTGTTTGCCCTCGGTGGTA
CAACTTATGGTATGGGGGAAGAAACAATGGCCTTCTATCCACTCCTTGTGCCAGTTATGATGGCCGTTGGTTTTGATAGC
CTGACTGGTGTTGCAATTATTTTGCTCGGTTCTCAAATCGGCTGTTTGGCATCTACTCTGAATCCATTTGCGACAGGTAT
TGCTTCAGCGACTGCGGGAGTTGGTACAGGGGACGGTATCGTACTTCGTCTGATCTTCTGGGTTACCTTGACTGCTCTTA
GTACTTGGTTTGTTTACCGTTATGCGGATAAGATTCAAAAAGATCCGACTAAGTCACTGGTTTATAGTACTCGCAAAGAA
GATTTGAAACACTTTAACGTAGAAGAATCTTCATCTGTAGAATCTACACTTAGCAGCAAACAAAAATCAGTTCTCTTCTT
ATTTGTGTTGACATTCATTTTGATGGTATTGAGCTTCATTCCATGGACAGACCTTGGCGTTACCATTTTTGATGACTTTA
ATGCTTGGTTGACTGGTCTTCCAGTTATTGGTAATATTGTCGGTTCATCTACTTCTGCACTAGGTACTTGGTACTTCCCA
GAAGGCGCAATGCTCTTTGCCTTTATGGGTATCCTGATTGGTGTTATTTATGGTCTTAAAGAAGATAAGATTATCTCTTC
CTTCATGAATGGTGCTGCTGACTTGCTCAGTGTTGCCTTGATCGTAGCGATTGCTCGTGGTATTCAAGTTATCATGAACG
ACGGTATGATTACCGATACAATCCTCAACTGGGGTAAAGAAGGCTTGAGCGGTCTATCTTCACAAGTCTTTATCGTTGTA
ACTTATATCTTCTATCTACCTATGTCATTCTTGATCCCATCTTCATCTGGTCTTGCCAGCGCAACTATGGGTATCATGGC
TCCACTTGGAGAATTTGTAAATGTCCGTCCTAGCTTGATTATCACTGCTTACCAATCTGCTTCAGGTGTCTTGAACTTGA
TTGCACCAACATCTGGTATTGTGATGGGAGCTCTTGCACTTGGACGTATCAACATTGGTACTTGGTGGAAATTCATGGGC
AAACTCGTAGTCGCTATTATTGTAGTGACCATCGCCCTTCTTCTCCTTGGAACCTTCCTTCCATTCCTATAA

Upstream 100 bases:

>100_bases
ATATGGTAAAACAAATATAAATAGAAAGCGTTTTCTTGAATGTTTATTTAAGAAAGTAGTTGGTTTTTTACACTTTGTTA
GACATCAGGAGGAAAAACAA

Downstream 100 bases:

>100_bases
AATAGTGAGTGAGGTGATTCCATGAAAATAGATATAACAAATCAAGTTAAAGATGAATTTCTTATATCATTAAAAACCTT
GATTTCCTATCCTTCAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MSEKAKKGFKMPSSYTVLLIIIAIMAVLTWFIPAGAFIEGIYETQPQNPQGIWDVLMAPIRAMLGTHPEEGSLIKETSAA
IDVAFFILMVGGFLGIVNKTGALDVGIASIVKKYKGREKMLILVLMPLFALGGTTYGMGEETMAFYPLLVPVMMAVGFDS
LTGVAIILLGSQIGCLASTLNPFATGIASATAGVGTGDGIVLRLIFWVTLTALSTWFVYRYADKIQKDPTKSLVYSTRKE
DLKHFNVEESSSVESTLSSKQKSVLFLFVLTFILMVLSFIPWTDLGVTIFDDFNAWLTGLPVIGNIVGSSTSALGTWYFP
EGAMLFAFMGILIGVIYGLKEDKIISSFMNGAADLLSVALIVAIARGIQVIMNDGMITDTILNWGKEGLSGLSSQVFIVV
TYIFYLPMSFLIPSSSGLASATMGIMAPLGEFVNVRPSLIITAYQSASGVLNLIAPTSGIVMGALALGRINIGTWWKFMG
KLVVAIIVVTIALLLLGTFLPFL

Sequences:

>Translated_503_residues
MSEKAKKGFKMPSSYTVLLIIIAIMAVLTWFIPAGAFIEGIYETQPQNPQGIWDVLMAPIRAMLGTHPEEGSLIKETSAA
IDVAFFILMVGGFLGIVNKTGALDVGIASIVKKYKGREKMLILVLMPLFALGGTTYGMGEETMAFYPLLVPVMMAVGFDS
LTGVAIILLGSQIGCLASTLNPFATGIASATAGVGTGDGIVLRLIFWVTLTALSTWFVYRYADKIQKDPTKSLVYSTRKE
DLKHFNVEESSSVESTLSSKQKSVLFLFVLTFILMVLSFIPWTDLGVTIFDDFNAWLTGLPVIGNIVGSSTSALGTWYFP
EGAMLFAFMGILIGVIYGLKEDKIISSFMNGAADLLSVALIVAIARGIQVIMNDGMITDTILNWGKEGLSGLSSQVFIVV
TYIFYLPMSFLIPSSSGLASATMGIMAPLGEFVNVRPSLIITAYQSASGVLNLIAPTSGIVMGALALGRINIGTWWKFMG
KLVVAIIVVTIALLLLGTFLPFL
>Mature_502_residues
SEKAKKGFKMPSSYTVLLIIIAIMAVLTWFIPAGAFIEGIYETQPQNPQGIWDVLMAPIRAMLGTHPEEGSLIKETSAAI
DVAFFILMVGGFLGIVNKTGALDVGIASIVKKYKGREKMLILVLMPLFALGGTTYGMGEETMAFYPLLVPVMMAVGFDSL
TGVAIILLGSQIGCLASTLNPFATGIASATAGVGTGDGIVLRLIFWVTLTALSTWFVYRYADKIQKDPTKSLVYSTRKED
LKHFNVEESSSVESTLSSKQKSVLFLFVLTFILMVLSFIPWTDLGVTIFDDFNAWLTGLPVIGNIVGSSTSALGTWYFPE
GAMLFAFMGILIGVIYGLKEDKIISSFMNGAADLLSVALIVAIARGIQVIMNDGMITDTILNWGKEGLSGLSSQVFIVVT
YIFYLPMSFLIPSSSGLASATMGIMAPLGEFVNVRPSLIITAYQSASGVLNLIAPTSGIVMGALALGRINIGTWWKFMGK
LVVAIIVVTIALLLLGTFLPFL

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=537, Percent_Identity=29.2364990689013, Blast_Score=195, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 54005; Mature: 53874

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEKAKKGFKMPSSYTVLLIIIAIMAVLTWFIPAGAFIEGIYETQPQNPQGIWDVLMAPI
CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]